Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060445.seq
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical pr...    81   7e-16
Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical pr...    81   7e-16
U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin pr...    71   6e-13
U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family ...    71   6e-13
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    50   1e-06
Z32680-3|CAA83598.1|  317|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical pr...    29   3.1  

>Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical
           protein T07C4.9b protein.
          Length = 455

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 36/81 (44%), Positives = 57/81 (70%)
 Frame = +3

Query: 9   GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 188
           GE + GTDES FN+IL ++++ QLR +F EY+  +   IE +I+ EFSG I  G+LA+  
Sbjct: 317 GEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLAVIA 376

Query: 189 CVKSKVGFFAERLYYSMKGIG 251
            ++++  +FA+ L+ SMKG+G
Sbjct: 377 VIRNRPAYFAKLLHDSMKGLG 397



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           D  LIR+ V+R+E D+GDI+  F   Y  SLE  I  D SG YK+ L+ LV+
Sbjct: 400 DNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMIKGDCSGAYKEGLIALVN 451



 Score = 35.5 bits (78), Expect = 0.035
 Identities = 22/76 (28%), Positives = 42/76 (55%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 203
           G + S   SIL  R+  Q ++I   ++ + GKD+   +K E  G  E  +LA+   + + 
Sbjct: 166 GCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILAL---MDAP 222

Query: 204 VGFFAERLYYSMKGIG 251
             + A++L+ +M+G+G
Sbjct: 223 AIYDAKQLHRAMEGLG 238



 Score = 34.3 bits (75), Expect = 0.082
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GT ES+   I+ +R+  Q++Q+   Y+ L  KD+E  +  E SG  ++ ++++
Sbjct: 238 GTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGHFKRLLVSL 290



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 254 HDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           ++  +I I+  R+     +I +AF   YGK L   +  +  GD++  +L L+D
Sbjct: 168 NNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILALMD 220


>Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.9a protein.
          Length = 497

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 36/81 (44%), Positives = 57/81 (70%)
 Frame = +3

Query: 9   GEGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 188
           GE + GTDES FN+IL ++++ QLR +F EY+  +   IE +I+ EFSG I  G+LA+  
Sbjct: 359 GEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLAVIA 418

Query: 189 CVKSKVGFFAERLYYSMKGIG 251
            ++++  +FA+ L+ SMKG+G
Sbjct: 419 VIRNRPAYFAKLLHDSMKGLG 439



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           D  LIR+ V+R+E D+GDI+  F   Y  SLE  I  D SG YK+ L+ LV+
Sbjct: 442 DNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMIKGDCSGAYKEGLIALVN 493



 Score = 35.5 bits (78), Expect = 0.035
 Identities = 22/76 (28%), Positives = 42/76 (55%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 203
           G + S   SIL  R+  Q ++I   ++ + GKD+   +K E  G  E  +LA+   + + 
Sbjct: 208 GCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILAL---MDAP 264

Query: 204 VGFFAERLYYSMKGIG 251
             + A++L+ +M+G+G
Sbjct: 265 AIYDAKQLHRAMEGLG 280



 Score = 34.3 bits (75), Expect = 0.082
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GT ES+   I+ +R+  Q++Q+   Y+ L  KD+E  +  E SG  ++ ++++
Sbjct: 280 GTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGHFKRLLVSL 332



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 254 HDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           ++  +I I+  R+     +I +AF   YGK L   +  +  GD++  +L L+D
Sbjct: 210 NNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILALMD 262


>U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin
           protein.
          Length = 322

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +3

Query: 30  DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 209
           D + F  IL T++  QLR++FA ++ L G  IE SI+KEFSG ++K  L I +    K  
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247

Query: 210 FFAERLYYSMKGIG 251
           FFA++L+ SMKG+G
Sbjct: 248 FFAQQLHASMKGLG 261



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           D  LIR++V+RSE+DL  IK  F E Y KSL   +  DTSG Y+ ALL++++
Sbjct: 264 DNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSIIN 315



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           +  LI I+ SR+   L  I+  + ++YGK+LE  IA DTSG+++  L++LV
Sbjct: 104 EAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSLV 154



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/76 (28%), Positives = 46/76 (60%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 203
           G  +++ N ++ + S  Q +Q+   Y+   GKDI  ++ K+FSG +EK + A+   +++ 
Sbjct: 30  GEKDAVVN-VITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFAL---METP 85

Query: 204 VGFFAERLYYSMKGIG 251
           + +  ++L  +MKG+G
Sbjct: 86  LDYDVKQLKAAMKGLG 101



 Score = 36.7 bits (81), Expect = 0.015
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GTDE++   IL +R+  QLR I   YE   GK +E  I  + SG     ++++
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSL 153



 Score = 36.3 bits (80), Expect = 0.020
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GT ++    +++TRS   L  I AE++ L  K + D++K + SG+    +L+I
Sbjct: 261 GTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSI 313



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 233 LDEGHRHHDK-TLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           +D   R  +K  ++ ++ S S      +++ +  KYGK +   +    SGD +KA+  L+
Sbjct: 23  IDRALRAGEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALM 82

Query: 410 D 412
           +
Sbjct: 83  E 83


>U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family
           protein 1 protein.
          Length = 322

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +3

Query: 30  DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 209
           D + F  IL T++  QLR++FA ++ L G  IE SI+KEFSG ++K  L I +    K  
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247

Query: 210 FFAERLYYSMKGIG 251
           FFA++L+ SMKG+G
Sbjct: 248 FFAQQLHASMKGLG 261



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 412
           D  LIR++V+RSE+DL  IK  F E Y KSL   +  DTSG Y+ ALL++++
Sbjct: 264 DNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSIIN 315



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = +2

Query: 257 DKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           +  LI I+ SR+   L  I+  + ++YGK+LE  IA DTSG+++  L++LV
Sbjct: 104 EAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSLV 154



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/76 (28%), Positives = 46/76 (60%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 203
           G  +++ N ++ + S  Q +Q+   Y+   GKDI  ++ K+FSG +EK + A+   +++ 
Sbjct: 30  GEKDAVVN-VITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFAL---METP 85

Query: 204 VGFFAERLYYSMKGIG 251
           + +  ++L  +MKG+G
Sbjct: 86  LDYDVKQLKAAMKGLG 101



 Score = 36.7 bits (81), Expect = 0.015
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GTDE++   IL +R+  QLR I   YE   GK +E  I  + SG     ++++
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVSL 153



 Score = 36.3 bits (80), Expect = 0.020
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 182
           GT ++    +++TRS   L  I AE++ L  K + D++K + SG+    +L+I
Sbjct: 261 GTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLSI 313



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 233 LDEGHRHHDK-TLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           +D   R  +K  ++ ++ S S      +++ +  KYGK +   +    SGD +KA+  L+
Sbjct: 23  IDRALRAGEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALM 82

Query: 410 D 412
           +
Sbjct: 83  E 83


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = +2

Query: 248 RHHDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           R    T+IRI VSRSEIDL DI   +  KY + LE  I   TSG+Y + + TL+
Sbjct: 279 RVDQSTIIRICVSRSEIDLQDISLEYKRKYQRPLEHDICQSTSGEYTRMICTLL 332


>Z32680-3|CAA83598.1|  317|Caenorhabditis elegans Hypothetical
           protein C28A5.3 protein.
          Length = 317

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +2

Query: 230 LLDEGHRHHDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           L  +G    DK LIRI+VSRSE DL  I+  F   +GK L   I ++   +Y+  L  LV
Sbjct: 252 LATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYRDGLTMLV 311



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/60 (33%), Positives = 35/60 (58%)
 Frame = +2

Query: 254 HDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVDK*GPEWG 433
           ++K LI I+ +R+  ++   K  +   Y KSLE  I+ DTSGD+++ L+ ++     E G
Sbjct: 101 NEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISADTSGDFRRLLIVILQAKREEGG 160



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = +3

Query: 51  ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 230
           IL++ +  Q + I   Y+   GKD+ED IKK FSG  E  ++A+   +++        L 
Sbjct: 36  ILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVAL---LQTPTKLDVTELN 92

Query: 231 YSMKGIG 251
            S+KG+G
Sbjct: 93  RSVKGLG 99



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/67 (26%), Positives = 38/67 (56%)
 Frame = +3

Query: 51  ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 230
           I  T +   ++++  E E  +GK+ +  I KE SG  +  +L++ +  ++K  +FA  ++
Sbjct: 192 IFATCNGAHIQKVIEEVERQSGKEFQKLIDKELSGDFKNLVLSLIETSRNKPRYFANSIH 251

Query: 231 YSMKGIG 251
            + KG+G
Sbjct: 252 LATKGMG 258



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 24  GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 203
           GT+E     IL TR+ +++      Y     K +ED+I  + SG   + ++ I +  + +
Sbjct: 99  GTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISADTSGDFRRLLIVILQAKREE 158

Query: 204 VGF 212
            GF
Sbjct: 159 GGF 161



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 233 LDEGHRHHDKT-LIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 409
           L++  R+ +K  ++ I+VS +      I+  +  +YGK LE  I    SGD++  L+ L+
Sbjct: 21  LEKALRNKEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVALL 80


>Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical
           protein C01G10.9 protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 27  TDESIFNSILITRSYQQLRQIFAEYEALT 113
           TDE + N IL+  +YQ+L   F + E LT
Sbjct: 147 TDEKLQNRILVWNAYQELLSAFPDKEKLT 175


>U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical
           protein F18A1.5 protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 96  EYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 188
           +Y AL   DI+D IK+E    +E  ++A+ K
Sbjct: 72  QYNALMSADIDDQIKREVEHLVEGTIIALTK 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,609,606
Number of Sequences: 27780
Number of extensions: 292190
Number of successful extensions: 814
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)