Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060444.seq
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        29   0.17 
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      25   2.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   6.5  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.5  
AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    23   8.7  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
 Frame = +1

Query: 241 ERQTEAVLDQVEMRVERLRKDTVRIEEEKDSL--LSTLDSIKHSELLLDISECDKDDITR 414
           E   + + D+ E   ERLR+D  ++EE++     L   D IK  EL+    +  + D  +
Sbjct: 124 ENTVQNIRDKKE--AERLRRDKAKVEEDQRHYRELKAADEIKRRELIQKAEDLIQKD--K 179

Query: 415 YADRIL-SRAMTVEVTVRTDRDHQ---QEEALYQVTCTSI 522
              R+L S A   EV    +   Q   ++E L Q+   S+
Sbjct: 180 VGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSV 219


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 432 VPGYDRRGDSAH*PRPSAGGSSVSGDMYIDQLVMSVHNDAVSA 560
           VP YD         +P +  SS  G+   D  ++  H DA +A
Sbjct: 30  VPTYDEEDFDEESLKPHSSSSSDDGEEEFDPSLLEEHADAPTA 72


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 203 GVVVNPLDTQSLMQID 156
           GVV+NPLD Q  +Q D
Sbjct: 492 GVVMNPLDAQCNVQRD 507


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 504 LIQSFLLLMVSVSAHCHLY 448
           LI   L  +VSV+A C+LY
Sbjct: 302 LINGILASLVSVTAGCYLY 320


>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 325 KDSLLSTLDSIKHSELLLDISECDKDDIT 411
           KD+     D +K    L D  + DKD +T
Sbjct: 24  KDAAKDATDKVKDKAALPDAPKLDKDAVT 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,579
Number of Sequences: 2352
Number of extensions: 15773
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)