Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060443.seq
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    35   7e-04
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 34.7 bits (76), Expect = 7e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 517 WMAPEVFEGSTYTEKCDVFSWGIILWEVLS 606
           WMA E      YT   DV+S+G++LWE+++
Sbjct: 660 WMALESLTHQRYTTYSDVWSFGVLLWEIVT 689



 Score = 30.3 bits (65), Expect = 0.015
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = +3

Query: 54  VVGKGAFGVVWKGVW-----RNRFVAVKHIN---SEAEKREFAIEVRQLSRV-CHPNIVR 206
           V+G+GAFG+V +            VAVK +    +  E R+F  E+  +  V  HP IV 
Sbjct: 456 VIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSEEIRQFTQEINIMKSVRQHPYIVS 515

Query: 207 LYGACTRG 230
           L G  T G
Sbjct: 516 LIGCVTEG 523


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = -3

Query: 314 LCIWVWVGCVVHYRESHLLHLHDEAYVSTPRARSVQSHNVWVTYAR*LAYL 162
           + +  W+G  +      ++  H E++ +    +   ++NV+ TYA  L YL
Sbjct: 171 MLLGAWLGATL-CSIPQMVVFHVESHPNITWYQQCVTYNVFPTYAHELTYL 220


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = -3

Query: 314 LCIWVWVGCVVHYRESHLLHLHDEAYVSTPRARSVQSHNVWVTYAR*LAYL 162
           + +  W+G  +      ++  H E++ +    +   ++NV+ TYA  L YL
Sbjct: 171 MLLGAWLGATL-CSIPQMVVFHVESHPNITWYQQCVTYNVFPTYAHELTYL 220


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 163 SIANSRFSASEFMCFTATNLF 101
           SI N  ++ ++FM FT+T ++
Sbjct: 167 SIINFGYTLAKFMIFTSTCIY 187


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 287 HNRPKPKYTAAHAMSWARQC 346
           + +P P+   +H   W  QC
Sbjct: 41  YRQPYPRQKKSHPPQWTWQC 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,063
Number of Sequences: 336
Number of extensions: 4986
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)