Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060442.seq
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 33 0.20
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 30 1.4
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 30 1.4
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_44729| Best HMM Match : SET (HMM E-Value=0) 30 1.9
SB_13090| Best HMM Match : Atrophin-1 (HMM E-Value=1.8) 30 1.9
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 2.5
SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01) 29 3.3
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 3.3
SB_25121| Best HMM Match : Hc1 (HMM E-Value=0.12) 29 4.4
SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9) 29 4.4
SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09) 29 4.4
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 4.4
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 28 7.7
SB_48075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +1
Query: 193 TTTPHRRILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSEL 372
T TP R + R++ E + ++ E ++ LR+ R+EE + L + + +L
Sbjct: 167 TITPFRHVASPRSSQLESLQRELAEKHESQLNELREQRARLEELQQQLSAEQAKQREQQL 226
Query: 373 LLDISECDKDDITRYADRILSRAMTVEVTVRTDRDHQQEEALYQ 504
LL+ +K + L +A E R R +++E L +
Sbjct: 227 LLE----EKQKTVTEEQQKLIQAQIDEQRERQKRLQEEQERLQE 266
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +1
Query: 208 RRILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDIS 387
+R L ++ E Q +A+ ++ ++ +E L ++ + ++ S S I+ E L +
Sbjct: 140 KRALQDQDQVMEEQQDALTER-QLEIESLTEELRTLTDQNTSTNSLSAEIRRLEGTLSVY 198
Query: 388 ECDKDDITRYADRILSRAMTVEVTVRTDRDHQQE 489
+KD + R D + +EV+ T Q E
Sbjct: 199 IKEKDQLQRELDALRKTEAGIEVSKLTTTSSQVE 232
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 247 QTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 414
Q + + ++ ++ ++ ++ +EEEKD L + LDS +E L +S C +D + R
Sbjct: 311 QLKEIENEYSVKADQYKQHIADLEEEKDQLQNELDS--QTEELRQVSLCLEDAMKR 364
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 247 QTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 414
Q + + ++ ++ ++ ++ +EEEKD L + LDS +E L +S C +D + R
Sbjct: 2 QLKEIENEYSVKADQYKQHIADLEEEKDQLQNELDS--QTEELRQVSLCLEDAMKR 55
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKH 363
EA + +E ERL+KD +++E SL LD++KH
Sbjct: 1166 EARNEALEDERERLKKDNSALQKEVSSLKIQLDALKH 1202
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 W*CPWH---NDGMSAHSRCQTYMNA-CTSSAGXPTRGTDKN 636
W CPWH N G A C N+ C S A TDKN
Sbjct: 1014 WQCPWHFCDNCGKRATVLCSECPNSFCRSHAQGQINSTDKN 1054
>SB_13090| Best HMM Match : Atrophin-1 (HMM E-Value=1.8)
Length = 988
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +1
Query: 319 EEKDSLLSTLDSIKHSELLLD 381
E +DSL+S++D+++HSE+L D
Sbjct: 575 EAQDSLVSSMDTLRHSEMLND 595
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 187 GFTTTPHRRILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHS 366
G P + S G + L RV+++ D +R + ++L+S ++ I+HS
Sbjct: 1461 GSNMEPFSPVAASFPPGQGSSSSLRLPPNASRVDKVIVDQLREHSKVETLVSRIERIRHS 1520
Query: 367 ELLLDISE 390
L + ISE
Sbjct: 1521 PLHISISE 1528
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = -1
Query: 588 VHIGLATGMRTHAVVVPRTS--PADRCTCHLIQSFLLLMVSVSAHCHLYGHS-----PGQ 430
+HI A + VV S R TC + QS +LL+ SVS +L G S G+
Sbjct: 581 LHIKEANAQKVRQSVVNHLSGRSVSRITCQVGQSVVLLVRSVSQSYYLSGRSVSHFLSGR 640
Query: 429 DAVRVSCDI 403
R++C +
Sbjct: 641 SVSRITCQV 649
>SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1419
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +1
Query: 211 RILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEE---EKDSLLSTLDSIKHSELLLD 381
++L + R+ + V +V R +R +++ ++I+E E LL +D + D
Sbjct: 1003 KLLRDKLGALSRRWKDVCSEVADRRDRFKEEEMQIQEFMEESGELLQWMDDTEAVLKTKD 1062
Query: 382 ISECDKDDITRYADRILSRAMTVEV---TVRTDR 474
+S D+D + D++ +E TV+T +
Sbjct: 1063 LSAADEDALEELLDKVKEVEREIEAKDDTVKTTK 1096
>SB_41535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 322 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 471
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKETLLDDVDVVED 72
>SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1482
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 432
+ +LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 623 DTLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLLDDVDDVDKDTLIDDVDVVD 681
Query: 433 SRAMTVEVTVRTD 471
+ V V D
Sbjct: 682 KDTLLDNVDVVED 694
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 432
+ +LD V++ + D V + + KD+LL +D + L+ D+ + DKD + D +
Sbjct: 1180 DTLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLIDDVDDVDKDTLLDDVDVVK 1238
Query: 433 SRAMTVEVTV 462
+ +V V
Sbjct: 1239 DVGLLEDVDV 1248
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 322 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 471
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKDTLLDDVDVVED 72
>SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01)
Length = 1171
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 432
+ +LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 159 DKLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVD 217
Query: 433 SRAMTVEVTV 462
+ +V V
Sbjct: 218 KDTLLDDVDV 227
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 432
+ +LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 334 DKLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLLDDVDDVDKDTLLDDVDVVD 392
Query: 433 SRAMTVEVTV 462
+ +V V
Sbjct: 393 KDTLLDDVDV 402
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 432
+ +LD V+ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 195 DTLLDDVDDVDKDTLLDDVDVVD-KDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVD 253
Query: 433 SRAMTVEVTVRTD 471
+ +V V D
Sbjct: 254 KDTLLDDVDVVDD 266
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 262 LDQVEMRVERLRKDTVRIEEE---KDSLLSTLDSIKHSELLLDISECDKDDI 408
+D V+ V+ + KDT+ + + KD+LL +D + +LL D+ DKD +
Sbjct: 297 VDVVDDDVDVVDKDTLLDDVDVVDKDTLLDDVDVVDGDKLLDDVDVVDKDTL 348
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 259 VLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSR 438
+LD V++ + D V + + KD+LL +D + +LL D+ DKD + D +
Sbjct: 125 LLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDVVDGDKLLDDVDVVDKDTLLDDVDVVDKD 183
Query: 439 AMTVEVTV 462
+ +V V
Sbjct: 184 TLLDDVDV 191
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 208 RRILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDIS 387
+R L R A +R A +Q + +ER VR+E++K +L +TLD I+ +L D +
Sbjct: 1769 KRELQERLAKFQRSVAAA-EQEKRELERAH---VRLEKDKKALRNTLDKIEREKLETDET 1824
Query: 388 ECDKDDITRYADR 426
D DR
Sbjct: 1825 NTRLRDDRERLDR 1837
>SB_25121| Best HMM Match : Hc1 (HMM E-Value=0.12)
Length = 320
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 292 LRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 414
LRKDTV+ E+ + T+ + K + L +D + +K D+ R
Sbjct: 24 LRKDTVKAEKGNVLRIDTVKAEKGNVLRIDTVKAEKGDVLR 64
>SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9)
Length = 459
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 322 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 471
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKDTLLDDVDVVED 72
>SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09)
Length = 782
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 322 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 471
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDGDTLLDDVDVVED 72
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 241 ERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIK 360
ER+ E + +MRV + I +++DSL LDS+K
Sbjct: 1175 ERRFENEMQASKMRVSKFEAQAHSIVKQRDSLREQLDSVK 1214
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/55 (23%), Positives = 33/55 (60%)
Frame = +1
Query: 205 HRRILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSE 369
H+ I S ++TE V++ + +++ L + ++ +++ SLL+TLD+++ +
Sbjct: 1872 HKGISESLKKTVSKKTE-VIEDLNRQIKYLEDELEKVRKKEVSLLATLDTLREEK 1925
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 271 VEMRVERLRKDTVRIEEE-KDSLLSTLDSIKHSELLLDISE---CDKDDITRYADRILSR 438
+E E DT+ +E +D LL + K E LL S+ D+I R A+ +L++
Sbjct: 451 LENLAESCEXDTITPDEILRDRLLFGIHDTKVRERLLRESKLTLAKTDEICRAAESMLAQ 510
Query: 439 AMTVEVTVRTDRDHQQEE 492
V+ T TD + Q+E
Sbjct: 511 MKIVKDTSETDVNAMQQE 528
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = +1
Query: 211 RILGSRNAGAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISE 390
RI R ER+ E ++ R+E +R+ R EEE+ L L+ + E L + E
Sbjct: 607 RIARERALERERERERERERERRRLEYMREQRRRQEEERARLQRELERRRELERLRVLRE 666
Query: 391 CDKDDITRYADRILSRAMTVEVTVRTDRDHQQEEALYQV 507
+ + +R R V R +R+ + E L +V
Sbjct: 667 RREREERERLER-ERREREVLERERLERERAERERLQRV 704
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 253 EAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSE 369
+AVLD +++LRKD + + E D L + D I+ E
Sbjct: 351 KAVLDMKNDEIKQLRKDRMEAKMELDHLRTKADRIRKLE 389
>SB_48075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 568 GNAHSCRRCATDITS*SMYMSPDTELPPADGLGQC 464
GN H +C TD T+ S+ M D A G+ C
Sbjct: 44 GNGHKAEKCPTDETNVSLAMFADNTTFIATGVNIC 78
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 190 FTTTPHRRILGSRNA--GAERQTEAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKH 363
F T RR+ G+ N + TE L+ ++ +L+++ VR+ +EK+ + L ++
Sbjct: 2849 FCETRTRRVTGTLNEVYSEKEDTEEELNVERVKSAKLQRELVRVCKEKEEMDKELKRLQS 2908
Query: 364 SE 369
E
Sbjct: 2909 EE 2910
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,597,299
Number of Sequences: 59808
Number of extensions: 442097
Number of successful extensions: 1157
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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