Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060440.seq
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.9  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    24   5.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   5.1  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   8.9  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    23   8.9  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    23   8.9  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   8.9  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 NQLCLSKSPNKHNRLFMKAQPMP 652
           N LC + SPN +    +  QP P
Sbjct: 159 NTLCAASSPNAYTNTTIAVQPAP 181


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +1

Query: 523 IPIKKSDPVVSYRETVAEESEPALSLKVAQQAQPSIHEGSAHA 651
           +P+     + S   T+   + PA+    +  A P+I++ SA A
Sbjct: 20  LPVAHHGSIASSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 34  PPTKVVSTPLDAFSLARLLPDKKLASWDQTLHLERKRTC 150
           P   VV+ P+DA S A L+   +      T  LE  R C
Sbjct: 89  PGNMVVAGPIDAGSCALLMAQLQNIGAQLTTALEELRLC 127


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 72  KRVQRRRNDLCRR 34
           KR  RR+N+LC+R
Sbjct: 268 KRSSRRKNELCQR 280


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 270 PVLTKTDRLQQDHRCYQRAHP 208
           P++ + DR  + H  ++ AHP
Sbjct: 190 PIILRIDRELEGHPAFRAAHP 210


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 523 IPIKKSDPVVSYRETVAEESEPALSLKVAQQAQPSIHEGSAHA 651
           +P+     + +   T+   + PA+    +  A P+I++ SA A
Sbjct: 20  LPVAHHGSIATSHSTIQHHAAPAIQHVGSVHAAPAIYQHSAPA 62


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 523 IPIKKSDPVVSYRETVAEESEPALSLKVAQQAQPSIHEGSAHA 651
           +P+     + +   T+   + PA+    +  A P+I++ SA A
Sbjct: 20  LPVAHHGSIATSHSTIQHHARPAIQHVGSIHAAPAIYQHSAPA 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,306
Number of Sequences: 2352
Number of extensions: 15434
Number of successful extensions: 71
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)