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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060440.seq
         (681 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p...   155   3e-38
At5g25230.1 68418.m02991 elongation factor Tu family protein tra...   104   6e-23
At1g06220.2 68414.m00656 elongation factor Tu family protein sim...   100   8e-22
At1g06220.1 68414.m00655 elongation factor Tu family protein sim...   100   8e-22
At3g22980.1 68416.m02898 elongation factor Tu family protein sim...    87   1e-17
At1g62750.1 68414.m07082 elongation factor Tu family protein sim...    58   7e-09
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati...    42   3e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati...    42   3e-04
At2g47500.1 68415.m05929 kinesin motor protein-related                 30   1.2  
At1g04650.1 68414.m00462 hypothetical protein                          29   2.8  
At1g24050.1 68414.m03036 expressed protein                             28   5.0  
At5g26210.1 68418.m03119 PHD finger family protein contains Pfam...    28   6.6  
At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /...    28   6.6  
At3g03405.1 68416.m00338 hypothetical protein temporary automate...    28   6.6  
At2g41620.1 68415.m05143 nucleoporin interacting component famil...    28   6.6  
At1g10750.1 68414.m01229 expressed protein similar to gi 3128199...    28   6.6  
At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containi...    27   8.7  
At3g47480.1 68416.m05163 calcium-binding EF hand family protein ...    27   8.7  
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog...    27   8.7  
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog...    27   8.7  
At1g51370.2 68414.m05778 F-box family protein contains F-box dom...    27   8.7  
At1g51370.1 68414.m05779 F-box family protein contains F-box dom...    27   8.7  

>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
           putative similar to ELONGATION FACTOR 2 GB:O14460 from
           [Schizosaccharomyces pombe]
          Length = 843

 Score =  155 bits (376), Expect = 3e-38
 Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 3/144 (2%)
 Frame = +2

Query: 257 LVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 430
           + K  T+T  K  +AH ++ MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C
Sbjct: 461 ITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC 520

Query: 431 INEESGEHIVAGAGELHLEICLKDLEXTMLAFQSRSLTLSCRTVRP*LRNRN-QLCLSKS 607
             EESGEHIVAGAGELHLEICLKDL+   +       +    + R  + +R+ +  +SKS
Sbjct: 521 TMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVCDRSTRTVMSKS 580

Query: 608 PNKHNRLFMKAQPMPDGLPEDIXE 679
           PNKHNRL+M+A+PM +GL E I +
Sbjct: 581 PNKHNRLYMEARPMEEGLAEAIDD 604



 Score =  126 bits (303), Expect = 2e-29
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = +3

Query: 9   VYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 188
           +YVSKM+P SDKGRF+AFGRVF+GKV TG K RIMGPN+ PG+K+DLY K++QRT++ MG
Sbjct: 378 LYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQRTVIWMG 437

Query: 189 RYVEAIEDVPSGNICGLVGVDQ 254
           +  E +EDVP GN   +VG+DQ
Sbjct: 438 KRQETVEDVPCGNTVAMVGLDQ 459


>At5g25230.1 68418.m02991 elongation factor Tu family protein
           translation Elongation Factor 2, Schizosaccharomyces
           pombe, PIR:T39902
          Length = 973

 Score =  104 bits (249), Expect = 6e-23
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
 Frame = +2

Query: 257 LVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ 427
           ++KT T+      ++ +  + +KF+  PVV+ A EP NP++LPK+VEGL++++KS P+  
Sbjct: 559 IMKTATLCNASYDEDVYIFRALKFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAI 618

Query: 428 CINEESGEHIVAGAGELHLEICLKDLEXTMLAFQSR---SLTLSCRTVRP*LRNRNQLCL 598
              EESGEH + G GEL+L+  +KDL       Q +    +   C TV   + + +  C 
Sbjct: 619 TKVEESGEHTILGTGELYLDSIIKDLRELYSEVQVKVADPVVSFCETV---VESSSMKCF 675

Query: 599 SKSPNKHNRLFMKAQPMPDGLPEDI 673
           +++PNK N+L M A+P+  GL EDI
Sbjct: 676 AETPNKKNKLTMIAEPLDRGLAEDI 700



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +3

Query: 9   VYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 188
           V V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   
Sbjct: 476 VNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQA 535

Query: 189 RYVEAIEDVPSGNICGLVGVD 251
           RY   +   P G+   + GVD
Sbjct: 536 RYRIPVSSAPPGSWVLIEGVD 556


>At1g06220.2 68414.m00656 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score =  100 bits (240), Expect = 8e-22
 Identities = 52/145 (35%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
 Frame = +2

Query: 257 LVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ 427
           ++KT T+      ++ +  + ++F+  PVV+ A EP NP++LPK+VEGL++++KS P+  
Sbjct: 573 IMKTATLCNASYDEDVYIFRALQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAI 632

Query: 428 CINEESGEHIVAGAGELHLEICLKDLEXTMLAFQSR---SLTLSCRTVRP*LRNRNQLCL 598
              EESGEH + G GEL+L+  +KDL       + +    +   C TV   + + +  C 
Sbjct: 633 TKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETV---VESSSMKCF 689

Query: 599 SKSPNKHNRLFMKAQPMPDGLPEDI 673
           +++PNK N++ M A+P+  GL EDI
Sbjct: 690 AETPNKKNKITMIAEPLDRGLAEDI 714



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +3

Query: 9   VYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 188
           V V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   
Sbjct: 490 VNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQA 549

Query: 189 RYVEAIEDVPSGNICGLVGVD 251
           RY   +   P G+   + GVD
Sbjct: 550 RYRIPVSSAPPGSWVLIEGVD 570


>At1g06220.1 68414.m00655 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score =  100 bits (240), Expect = 8e-22
 Identities = 52/145 (35%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
 Frame = +2

Query: 257 LVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ 427
           ++KT T+      ++ +  + ++F+  PVV+ A EP NP++LPK+VEGL++++KS P+  
Sbjct: 573 IMKTATLCNASYDEDVYIFRALQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAI 632

Query: 428 CINEESGEHIVAGAGELHLEICLKDLEXTMLAFQSR---SLTLSCRTVRP*LRNRNQLCL 598
              EESGEH + G GEL+L+  +KDL       + +    +   C TV   + + +  C 
Sbjct: 633 TKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETV---VESSSMKCF 689

Query: 599 SKSPNKHNRLFMKAQPMPDGLPEDI 673
           +++PNK N++ M A+P+  GL EDI
Sbjct: 690 AETPNKKNKITMIAEPLDRGLAEDI 714



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +3

Query: 9   VYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 188
           V V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   
Sbjct: 490 VNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQA 549

Query: 189 RYVEAIEDVPSGNICGLVGVD 251
           RY   +   P G+   + GVD
Sbjct: 550 RYRIPVSSAPPGSWVLIEGVD 570


>At3g22980.1 68416.m02898 elongation factor Tu family protein
           similar to eukaryotic translation elongation factor 2
           GB:NP_001952 [Homo sapiens]
          Length = 1015

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 37/82 (45%), Positives = 59/82 (71%)
 Frame = +2

Query: 263 KTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 442
           K+ T+++ +N   +  M+F VSP +RVA+EP +PAD+  L++GL+ L ++DP V+     
Sbjct: 515 KSATLSSTRNCWPLASMEFQVSPTLRVAIEPSDPADMSALMKGLRLLNRADPFVEITVSA 574

Query: 443 SGEHIVAGAGELHLEICLKDLE 508
            GEH++A AGE+HLE C+KDL+
Sbjct: 575 RGEHVLAAAGEVHLERCVKDLK 596



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = +3

Query: 51  FYAFGRVFSGKVVTGQKARIMGPNFTPGKKED----LYEKTIQRTILMMGRYVEAIEDVP 218
           F AF R+FSG +  GQ+  ++   + P K E     + E  +    LMMG+ +  + +V 
Sbjct: 440 FLAFARIFSGVLRAGQRVFVITALYDPLKGESSHKYIQEAELHSLYLMMGQGLTPVTEVK 499

Query: 219 SGNICGLVGV 248
           +GN+  + G+
Sbjct: 500 AGNVVAIRGL 509


>At1g62750.1 68414.m07082 elongation factor Tu family protein
           similar to elongation factor G SP:P34811 [Glycine max
           (Soybean)]
          Length = 783

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 272 TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ-CINEESG 448
           T++  +N   ++ M F   PV++VA+EPK  AD+ K+  GL +LA+ DP      +EE  
Sbjct: 475 TLSDPENPVVLERMDFP-DPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRDEEMN 533

Query: 449 EHIVAGAGELHLEICLKDLE 508
           + ++ G GELHLEI +  L+
Sbjct: 534 QTVIEGMGELHLEIIVDRLK 553


>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
           similar to SP|P25039 Elongation factor G 1,
           mitochondrial precursor (mEF-G-1) {Saccharomyces
           cerevisiae}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03764: Elongation factor
           G domain IV, PF00679: Elongation factor G C-terminus
          Length = 754

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 329 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 490
           PV+ +AV+P +     +  + L R  K DP  +  ++ ESG+ I++G GELHL+I
Sbjct: 461 PVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDI 515


>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
           similar to mitochondrial elongation factor GI:3917 from
           [Saccharomyces cerevisiae]
          Length = 754

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 329 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 490
           PV+ +AV+P +     +  + L R  K DP  +  ++ ESG+ I++G GELHL+I
Sbjct: 461 PVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDI 515


>At2g47500.1 68415.m05929 kinesin motor protein-related 
          Length = 974

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 287 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 394
           +N  N      S+S +VR  +  K P D+PKL+E L
Sbjct: 218 ENDSNKLSSPSSLSTLVRAVLSDKKPEDVPKLIESL 253


>At1g04650.1 68414.m00462 hypothetical protein
          Length = 936

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 239 KTTDVTRGHILNSFNITPHHKDCTLDSLLIQVLFLSRCKVWSHDA 105
           KTT    G +LN+  +T   +   LDSL +       CK  SHD+
Sbjct: 334 KTTVDLLGALLNAAELTQEFRLTLLDSLFVDEFSNQICKKQSHDS 378


>At1g24050.1 68414.m03036 expressed protein
          Length = 173

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 42  KGRFYAFGRVFSGKVVTGQKARIMGPNFTPG 134
           +G  +A G ++S KV+TG + R +G    PG
Sbjct: 15  EGEKFAVGNIYSVKVITGDEFRGIGTKPRPG 45


>At5g26210.1 68418.m03119 PHD finger family protein contains Pfam
           domain, PF00628: PHD-finger
          Length = 255

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 581 RNQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 673
           +  LCL   PN+H  + + A+ +P  LPE +
Sbjct: 45  KENLCLYGHPNEHWEVNLPAEEVPPELPEPV 75


>At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /
           polygalacturonase (pectinase) family protein weak
           similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15)
           (Pectinase) {Agrobacterium tumefaciens}; contains
           PF00295: Glycosyl hydrolases family 28
          Length = 475

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 218 LW*HLWSCWSRSVLVKTGTITTFKNAHNMKVMKFSV 325
           +W  LW  W+R+++   G +   KN+HN+ +   ++
Sbjct: 193 MWWELW--WNRTLVHTRGHLIELKNSHNILISNLTL 226


>At3g03405.1 68416.m00338 hypothetical protein temporary automated
           functional assignment
          Length = 193

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 558 VRHDRVRLLDWNASMVXSRSLRQISRWSSPAPATMC 451
           VR D  RL+ WN  +  +RS++ +  W + + A  C
Sbjct: 27  VRGDNTRLVVWNPYIGQTRSIKLVKGWDTCSYAFGC 62


>At2g41620.1 68415.m05143 nucleoporin interacting component family
           protein contains Pfam profile PF04097: Nucleoporin
           interacting component
          Length = 861

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 125 KVWSHDASFLSGNNLARENASKGVETTFVGGRHHLAHVH 9
           K+W    +    ++  R+  SK +    +G RHHL H H
Sbjct: 251 KIWQLVQAITGEDSAVRQGVSKRMALA-IGARHHLQHGH 288


>At1g10750.1 68414.m01229 expressed protein similar to gi 3128199
           F4I1.5 putative proteinase from Arabidopsis thaliana BAC
           gb AC004521
          Length = 467

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -1

Query: 591 SWFRFLSYGLTVRHDRVRLLD-WNASMVXSRSLRQISRWSSPAPATMCSPDSSLIHCTM 418
           S+   LS  L+ R+  +R LD  N     ++ LR+I++   P+  T+ SPD  +I C +
Sbjct: 77  SFSSVLSENLSPRNQTLRPLDELNKLKAINQHLRKINK---PSIKTIHSPDGDIIDCVL 132


>At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 845

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 25  WCRPPTKVVSTPLDAFSLARLLPDK 99
           WC+P TK+  T L    +  ++PDK
Sbjct: 801 WCKPYTKLTLTLLFVVEVVAIVPDK 825


>At3g47480.1 68416.m05163 calcium-binding EF hand family protein
           contains INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 183

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 329 PVVRVAVEPKNPADLPKLVEGLKRLAK-SDPMVQCINEESGEHIV 460
           P+++  V P N AD+   VE +K +   S+ + +C+ EE  E+++
Sbjct: 63  PIIKKVVVP-NRADIKTSVEEVKAIIDDSEALYECLIEEGEEYLL 106


>At3g06850.2 68416.m00813 branched chain alpha-keto acid
           dehydrogenase E2 subunit (din3) identical to branched
           chain alpha-keto acid dehydrogenase E2 subunit (din3)
           [Arabidopsis thaliana] GI:7021284
          Length = 483

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +2

Query: 338 RVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEXTM 517
           +VA+   +P D+ K+ E L RLA  D     +  +S E +  G  +   E  L  L    
Sbjct: 128 KVALISHSPGDIIKVGETLVRLAVEDSQDSLLTTDSSEIVTLGGSKQGTENLLGALSTPA 187

Query: 518 LAFQSRSLTLSCRTV 562
           +   ++ L +    +
Sbjct: 188 VRNLAKDLGIDINVI 202


>At3g06850.1 68416.m00812 branched chain alpha-keto acid
           dehydrogenase E2 subunit (din3) identical to branched
           chain alpha-keto acid dehydrogenase E2 subunit (din3)
           [Arabidopsis thaliana] GI:7021284
          Length = 483

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +2

Query: 338 RVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEXTM 517
           +VA+   +P D+ K+ E L RLA  D     +  +S E +  G  +   E  L  L    
Sbjct: 128 KVALISHSPGDIIKVGETLVRLAVEDSQDSLLTTDSSEIVTLGGSKQGTENLLGALSTPA 187

Query: 518 LAFQSRSLTLSCRTV 562
           +   ++ L +    +
Sbjct: 188 VRNLAKDLGIDINVI 202


>At1g51370.2 68414.m05778 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 346

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 606 DFERQSWFRFLSYGLTVRHDRVRLLDW 526
           D  R SW R L   L   HD+  L+ W
Sbjct: 83  DSHRDSWIRKLRLDLGYHHDKYDLMSW 109


>At1g51370.1 68414.m05779 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 435

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 606 DFERQSWFRFLSYGLTVRHDRVRLLDW 526
           D  R SW R L   L   HD+  L+ W
Sbjct: 83  DSHRDSWIRKLRLDLGYHHDKYDLMSW 109


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,620,110
Number of Sequences: 28952
Number of extensions: 326423
Number of successful extensions: 1064
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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