Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060438.seq
(679 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 111 7e-26
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 109 4e-25
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 91 1e-19
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 85 7e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 76 4e-15
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 48 9e-07
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 41 2e-04
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 7.6
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 111 bits (268), Expect = 7e-26
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
GQIIPWNFP LM AWK+ PA+A G T+++K AE TPL+AL + + V E GFPPGV+N+L
Sbjct: 165 GQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPPGVINVLS 224
Query: 188 GYG-DTGAAIVDHPDVDKVAFTG 253
G G G AI H D+DKVAFTG
Sbjct: 225 GDGRRCGNAISSHMDIDKVAFTG 247
Score = 91.9 bits (218), Expect = 8e-20
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TEVGKLIQRGAAST-IKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGS 432
T VG+++ R AAS+ +K++TLELGGKSPNIV D DL A + +FYN GQ CCAGS
Sbjct: 249 TGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAGS 308
Query: 433 RTFVEDKIYXQFVELSAERANRRVVXTPF 519
R +V++ +Y +F++ +A V PF
Sbjct: 309 RVYVQEDVYDEFIKRMVAKAKTLKVGDPF 337
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 109 bits (262), Expect = 4e-25
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
GQI+PWN+P+ MA WK+ PALA G +++K AE TPL+ LY A LV+EAGFP GVVN++
Sbjct: 159 GQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIIS 218
Query: 188 GYGD-TGAAIVDHPDVDKVAFTG 253
G G G+ + HP +DK+AFTG
Sbjct: 219 GLGTVAGSYMAKHPGIDKIAFTG 241
Score = 79.0 bits (186), Expect = 6e-16
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
T+VG ++Q+ AAS +K +TLE GGKSP +V D DL +AV+ + YN GQ C + SR
Sbjct: 243 TKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSR 302
Query: 436 TFVEDKIYXQFVELSAERA-NRRVVXTPF 519
+V+D +Y +F+EL + +V PF
Sbjct: 303 IYVQDSVYDKFIELFKKHVIQDYIVGMPF 331
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I PWNFP+ MA WKL PA+A+G VV+KP+E P + L A + KEAG P GV+N++
Sbjct: 167 GVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGVLNVII 226
Query: 188 GYG-DTGAAIVDHPDVDKVAFTG 253
G G ++GAA+ HP + +AFTG
Sbjct: 227 GSGKESGAALSCHPKIAYLAFTG 249
Score = 65.7 bits (153), Expect = 6e-12
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +1
Query: 265 GKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTFV 444
GK I AA I +TLELGGKSP I+ D DL A+ + A+F+N G+ C A SR V
Sbjct: 254 GKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRLIV 313
Query: 445 EDKIYXQFVELSAERANRRVVXTPFGP 525
+ + + + AN+ ++ P
Sbjct: 314 HESVADEVLGGLVSEANKLIIGNGLDP 340
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 85.4 bits (202), Expect = 7e-18
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I PWNFP M K+G ALA GCTVV++PA +TP TAL +A+L + AG P GV+NM+
Sbjct: 164 GIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVT 223
Query: 188 GY--GDTGAAIVDHPDVDKVAFTG 253
+ G + +P + KV+FTG
Sbjct: 224 ANSPSEHGIELTTNPLIRKVSFTG 247
Score = 72.9 bits (171), Expect = 4e-14
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
T VGK++ + ++ST+K+++LELGG +P IV D DL +A +A F GQ C +R
Sbjct: 249 TNVGKILAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCANR 308
Query: 436 TFVEDKIYXQFVELSAERANR 498
+V +Y FV+L ER ++
Sbjct: 309 IYVHSSVYDAFVDLVTERVSK 329
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 76.2 bits (179), Expect = 4e-15
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
I PWNFP M A K G ALA GCT + PA +TP L + +L +EAGFP GV+N++
Sbjct: 161 ITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGFPDGVLNVITSS 220
Query: 194 GDT--GAAIVDHPDVDKVAFTG 253
+ G + +P V KV+FTG
Sbjct: 221 DASAHGKELTTNPIVRKVSFTG 242
Score = 65.3 bits (152), Expect = 8e-12
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
T VGK++ +ASTIK++++ELGG +P IV D + +AVE+ F + GQ C +R
Sbjct: 244 TNVGKILMGQSASTIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPNR 303
Query: 436 TFVEDKIYXQFVELSAER 489
+V +Y +FV E+
Sbjct: 304 VYVHKNVYDEFVSKLTEK 321
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 48.4 bits (110), Expect = 9e-07
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
I P+NF + P L G V+MKP++ L++ + Q+ +EAG P G + +PG
Sbjct: 189 ITPFNFTAIAGNLAAAPLLM-GNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGD 247
Query: 194 G-DTGAAIVDHPDVDKVAFTG 253
+ +HP+ + FTG
Sbjct: 248 AVEVSKVCFNHPEFAGLHFTG 268
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 262 VGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTF 441
+G+ + G T +I E GGK+ ++V + ++ AV A F GQ C A SR +
Sbjct: 280 IGENVANGKYRTYPKIVGETGGKNFHLVHSSAEIKSAVVNAVRAAFEYQGQKCSALSRLY 339
Query: 442 V 444
V
Sbjct: 340 V 340
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +1
Query: 262 VGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTF 441
+ KL+ AA + + LELGGK P I+ D L + +F + GQ C R
Sbjct: 221 IAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERII 280
Query: 442 VEDKIYXQFV 471
D +Y +
Sbjct: 281 ALDGVYDTII 290
Score = 33.5 bits (73), Expect = 0.029
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTP-LTALY---IAQLVKEAGFPPGVVNM 181
++ WN+P+ A + AL G +V+K +E T T Y + L++ G P +V
Sbjct: 134 LVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQC 193
Query: 182 LPGYGDTGAAIVDHPDVDKVAFTG 253
+ D + H + + F G
Sbjct: 194 ITCLPDVADHLTSHSGIKHITFIG 217
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 115 RRLLGRLHDHSTTRRQSWPELPSRHQYREVP 23
+ +LG+ D + RR S SRH+Y E P
Sbjct: 35 KTVLGKGKDSNHDRRTSTDTTHSRHRYPETP 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,092,375
Number of Sequences: 5004
Number of extensions: 35861
Number of successful extensions: 129
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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