Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060438.seq
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 109 2e-24
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 8e-24
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 105 3e-23
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 104 6e-23
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 94 1e-19
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 77 1e-14
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 73 2e-13
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 72 5e-13
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 57 2e-08
SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 49 3e-06
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 39 0.004
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 35 0.070
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 34 0.12
SB_38116| Best HMM Match : APC8 (HMM E-Value=3.3) 29 4.6
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 28 6.0
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 28 8.0
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 122 bits (295), Expect = 2e-28
Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I PWNFP+ MA+ K+ PALA G V++KPAEQTPLTALY LVKEAGFP GVVN++P
Sbjct: 472 GAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPLTALYFCALVKEAGFPAGVVNVIP 531
Query: 188 GYGDT-GAAIVDHPDVDKVAFTG 253
GYG T GAAI H D+DKV+FTG
Sbjct: 532 GYGPTAGAAITTHLDIDKVSFTG 554
Score = 120 bits (288), Expect = 1e-27
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TEVGKLIQRGAA-STIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGS 432
TEVG+LIQ +A S +KR+TLELGGKSPNIV AD+D+ AVE H ALF+N GQCC AGS
Sbjct: 556 TEVGRLIQEASAKSNLKRLTLELGGKSPNIVFADSDMDYAVEMAHEALFFNQGQCCSAGS 615
Query: 433 RTFVEDKIYXQFVELSAERANRRVVXTPF 519
RTFV+D IY +FV+ S +RA R V PF
Sbjct: 616 RTFVQDTIYDEFVKKSVKRAKARTVGDPF 644
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 465 VRRVVGRARQPPRGRDPFRPDVEQGPQIDNEQRDKILQLI 584
V++ V RA+ G DPF VEQGPQID EQ DKI+ LI
Sbjct: 628 VKKSVKRAKARTVG-DPF-DSVEQGPQIDQEQFDKIMDLI 665
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 109 bits (263), Expect = 2e-24
Identities = 48/74 (64%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I+ WNFP+L+A WKLGPALATGCT V+KPAE TPLTAL +A+L EAG+P GVVN++
Sbjct: 192 GAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTPLTALKLAELALEAGYPAGVVNVVT 251
Query: 188 GYG-DTGAAIVDHP 226
G G + GAA+ HP
Sbjct: 252 GLGHEAGAALSSHP 265
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 107 bits (257), Expect = 8e-24
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I+PWNFP+++ WK+ PALA G TVV+KPA T L+AL A++ EAG PPGV N++
Sbjct: 772 GGIVPWNFPLMLLCWKVCPALAMGNTVVLKPATYTRLSALLFAEICAEAGLPPGVFNVVT 831
Query: 188 GYGDTGAAIVDHPDVDKVAFTG 253
G G G+ + HPDVDKVAFTG
Sbjct: 832 GNGAFGSQLAGHPDVDKVAFTG 853
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
TEVGKL+++ A + K+++LELGGKSP +V DL AVE +A+++N GQ C AGSR
Sbjct: 855 TEVGKLLRQLTAGSGKKLSLELGGKSPFVVFDSADLDSAVEGVVDAIWFNQGQVCSAGSR 914
Query: 436 TFVEDKIYXQFVELSAER 489
V++ + ++ ER
Sbjct: 915 LLVQETCAQRMIKKIKER 932
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 105 bits (252), Expect = 3e-23
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 VTEVGKLIQRGAA-STIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAG 429
V EVG+LIQ AA S +KR+TLELGGKSPNIV AD DL AVE LF N GQCCCAG
Sbjct: 1387 VKEVGRLIQETAAKSNLKRVTLELGGKSPNIVFADADLDWAVEMSCLGLFINQGQCCCAG 1446
Query: 430 SRTFVEDKIYXQFVELSAERANRRVVXTP 516
+R FVE+ I+ +FV RA RVV P
Sbjct: 1447 TRIFVEESIHDEFVRQCVARAKARVVGDP 1475
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAG 157
G I PWNFP+LM KL PALA GC V++KPAEQTPLTALY+A LVKE G
Sbjct: 1342 GAITPWNFPLLMEGLKLAPALACGCVVILKPAEQTPLTALYLASLVKEVG 1391
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 104 bits (250), Expect = 6e-23
Identities = 45/83 (54%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I PWN P+ + ++K+ PA+A+GCTVV KP+E T +TA +A+L+ +AGFPPGV+N++
Sbjct: 151 GLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVTAWMMAELINDAGFPPGVINIVF 210
Query: 188 GYGD-TGAAIVDHPDVDKVAFTG 253
G G TG+AIV HPDV ++FTG
Sbjct: 211 GTGSRTGSAIVQHPDVHLISFTG 233
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I WN+PI A WK+ PA+A G T+V KP+ TP+ A+ +A ++ EAG PPGVVN++
Sbjct: 415 GGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPMNAVALADILTEAGVPPGVVNIIQ 474
Query: 188 GYGDTGAAIVDHPDVDKVAFTG 253
G G+TG + P+V KV+FTG
Sbjct: 475 GGGETGEMLSKDPNVAKVSFTG 496
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/87 (43%), Positives = 46/87 (52%)
Frame = +1
Query: 265 GKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTFV 444
G+ I A IK +TLELGGKSP I+ D D+ AV A F + GQ C G+R FV
Sbjct: 501 GQKIMASCADGIKHVTLELGGKSPLIIFKDADMANAVSGALMANFLSQGQVCSNGTRVFV 560
Query: 445 EDKIYXQFVELSAERANRRVVXTPFGP 525
ED I +F+E ER V P P
Sbjct: 561 EDSIKDEFLEKVVERTKNIRVGDPMAP 587
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +2
Query: 23 WNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGYGDT 202
WNFP+ M K ALA GCTV++KP+E+TP AL + QL +EAGFP GV+N +P D
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETPFCALALQQLAEEAGFPAGVINTIPCSRDR 208
Query: 203 GAAIVD---HPD-VDKVAFTG 253
+ D D V K++FTG
Sbjct: 209 VNEVTDTVLKSDLVSKMSFTG 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
T GK++ T+K+++LELGG +P IV ++ AV+ + N Q C +R
Sbjct: 231 TATGKILMAKCVDTVKKMSLELGGNAPFIVFNSANIESAVKGALICKYRNTAQTCICANR 290
Query: 436 TFVEDKIYXQFVELSAERANRRV 504
V+D IY +F + AE ++++
Sbjct: 291 IIVQDGIYDEFAKRFAEAVDQQL 313
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 187
G I PWNFP AWK+ PALA G +V KPA Q P +A + +++ P G N++
Sbjct: 146 GIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAWALTEIISRQNLPAGTFNLVM 205
Query: 188 GYG-DTGAAIVDHPDVDKVAFTG 253
G G D G +++ ++ + FTG
Sbjct: 206 GPGADVGDVMINSRGINALTFTG 228
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 259 EVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVE 378
E G+ + A + + LE+G K+ IVL D DL AVE
Sbjct: 231 ETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 256 TEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSR 435
T VG+ + + +A T+K+++LELGG +P I+ D +L +AV N+ F N GQ C +R
Sbjct: 170 TAVGQDLYQKSAKTLKKLSLELGGNAPFIIFDDANLDKAVSGLINSKFRNAGQTCVCANR 229
Query: 436 TFVEDKIYXQFVE 474
FV+ KIY QF+E
Sbjct: 230 VFVDSKIYDQFIE 242
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
I PWNFPI M K A+A GCT++ +P+ QTPL+AL + +L +A P GV N++ G
Sbjct: 88 ITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPLSALALGELALKAEIPDGVFNIIVGS 147
Query: 194 GD-TGAAIVDHPDVDKVAFTG 253
+ D + K++FTG
Sbjct: 148 SSLISNKLCDSDIIRKLSFTG 168
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 AEQTPLTALYIAQLVKEAGFPPGVVNMLPGYGD-TGAAIVDHPDVDKVAFTG 253
A+ TP+TAL A+L AGFP GV+N+LPG G G I +HPDV K+ FTG
Sbjct: 755 AKVTPMTALKFAELAARAGFPKGVINILPGSGSVVGNRICEHPDVRKLGFTG 806
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
I W+ + L PA+A+G VV+KP+ PLT +A+++K++G P GVVN++ G
Sbjct: 158 ITSWSQALPSILRHLVPAMASGNCVVIKPSCLAPLTVHLLAKVLKDSGIPKGVVNIVYGR 217
Query: 194 GDT-GAAIVDHPDVDKVAFTG 253
G+ G + H DV VA G
Sbjct: 218 GEVIGRILARHHDVAAVALVG 238
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 IKRITLELGGKSPNIVLADTDLPRAVEAXHNALFY-NMGQCCCAGSRTFVEDKIYXQFVE 474
+KR++ ELG +V D DL + A F N GQ A +R FV + F E
Sbjct: 254 VKRVSYELGNCHAMVVYDDVDLDELIPTVIKASFLCNAGQHPHAVNRIFVHGAVLEIFTE 313
Query: 475 LSAERANRRVVXTP 516
+ + + P
Sbjct: 314 KLVKAIRKIKIGNP 327
>SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AGFPPGVVNMLPGYGDT-GAAIVDHPDVDKVAFTG 253
AGFP GVVN++PG+G T G AI H DVDK+AFTG
Sbjct: 1 AGFPEGVVNIVPGFGPTAGGAIASHMDVDKIAFTG 35
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = +1
Query: 262 VGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTF 441
VGKL+ AA + R+TLELGGKSP + D D+ F N GQ C A
Sbjct: 160 VGKLVMAAAAKNLTRVTLELGGKSPCYIDEDCDMKTVARRICWGKFTNSGQTCVAPDYVL 219
Query: 442 VEDKIYXQFVELSAE 486
I +F++ E
Sbjct: 220 CNPGIQSKFIKSMKE 234
Score = 35.5 bits (78), Expect = 0.040
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
I WN+P+ + L A+A G V+KP+E TA +A LV + P + G
Sbjct: 79 ISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVADLVPKYLDPDCYPVVNGGV 138
Query: 194 GDTGAAIVDHPDVDKVAFTG 253
+T + + DK+ +TG
Sbjct: 139 PETQQLL--NQKFDKIFYTG 156
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 193
+ P+NF + PAL G V+ KPA L+ + ++ +EAG P GV+N +P
Sbjct: 184 VSPFNFTAIGGNLAGTPALM-GNVVLWKPASTAILSQYRVMEMFQEAGLPDGVINFVPSS 242
Query: 194 GDT-GAAIVDHPDVDKVAFTG 253
G T G A+ P + V FTG
Sbjct: 243 GSTFGNAMTTSPHLAAVNFTG 263
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 283 GAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQCCCAGSRTFVEDKIYX 462
G+ T ++ E GGK+ + V DL V + A F GQ C A SR +V +
Sbjct: 263 GSVETYPKLVGECGGKNYHFVHMSADLDVVVNSTIRAAFGYQGQKCSACSRLYVPKSRWP 322
Query: 463 QFVE 474
+ E
Sbjct: 323 EIKE 326
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 RITLELGGKSPNIVLADTDLPRAV-EAXHNALFYNMGQCCCAGSRTFVEDKIYXQFVELS 480
R+ L L K+P IVL D D+ AV E + AL +N GQ C A FV + I +F +
Sbjct: 10 RLVLGLEAKNPGIVLPDCDIDLAVRECVNGALAFN-GQRCTALKILFVHEDIVEEFNQKF 68
Query: 481 AERANRRVVXTPF 519
E+ P+
Sbjct: 69 IEQVENLKYGNPW 81
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 268 KLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAXHNALFYNMGQ 414
K++ T+K+++LELGG +P +V D+ +AV F N Q
Sbjct: 153 KILMAKCVVTVKKMSLELGGNAPFVVFNSADIDKAVNGAVVYKFRNTAQ 201
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 397 FYNMGQCCCAGSRTFVEDKIYXQFVELSAERANRRVVXTP 516
F N G+ C SR FV+ IY F+++ + + +V P
Sbjct: 4 FANQGEICLCTSRIFVQRSIYDNFLDMFVQETRKLIVGPP 43
>SB_38116| Best HMM Match : APC8 (HMM E-Value=3.3)
Length = 326
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 298 SSTPRRAGSACPPPSPGEGHFIHVGV 221
+S RR S P PSP E ++H+GV
Sbjct: 72 TSKQRRKSSTPPQPSPPESFWLHLGV 97
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 586 LISCRILSRCSLSIWGPCSTSGRKGSRPRGGWR---ARPTTLRTG 461
L++ R C +++W C++ P GW+ PTT+ G
Sbjct: 392 LLTARRAKSCLVAVWAACASMSLLALGPFSGWKYIVFNPTTVHCG 436
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 298 SSTPRRAGSACPPPSPGEGH 239
S +P R+GS P SPG GH
Sbjct: 659 SYSPERSGSHSEPQSPGRGH 678
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 156 PASLTS*AMYSAVSGVCSAGFMTTVQPVARAGPSFQAA 43
PA+ A ++S GF T+ QPVA G SF A
Sbjct: 467 PATTFPVASTGSMSAAAGVGFGTSSQPVAAGGLSFPTA 504
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,359,262
Number of Sequences: 59808
Number of extensions: 335400
Number of successful extensions: 1095
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -