Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060438.seq
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   2.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.9  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   3.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.7  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 191 YGDTGAAIVDHPDVDKVA 244
           YGDTGA   +H D++++A
Sbjct: 322 YGDTGAHCGNHQDLNEIA 339


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 495 PPRGRDPFRPDVEQGP 542
           PP G DP  P+ + GP
Sbjct: 823 PPNGTDPDEPEKQHGP 838


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 423  AAALSHVVEERVVXGLHGARQVGVGQH 343
            + AL HV ++  V   HG  ++G G H
Sbjct: 1008 SGALIHVYQDGTVLLTHGGTEMGQGLH 1034


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 334 ATCRPAPT*CALSSTPRRAGSACPPPSP 251
           ++C P  T  + S +   AGS CP   P
Sbjct: 236 SSCSPLSTASSASCSSSAAGSLCPTSPP 263


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 553 LSIWGPCSTSGRKGSRPRGGWRARPTTL 470
           + + GP   SGRKG R   G    P T+
Sbjct: 444 MGLTGPVGLSGRKGDRGVPGSPGLPATV 471


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -2

Query: 195 P*PGNIFTTPGGKPASLTS*AMYSAVSGVCSAGFMTTVQPVARAGPSFQAAINI 34
           P P  + TTP  K A+ +S ++ +  +   +AG      P+A A  +  + +++
Sbjct: 113 PRPAEVPTTPEHKSAASSSCSLSTLETQTATAGASVQSLPIAIATGATSSTVSL 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,697
Number of Sequences: 2352
Number of extensions: 9942
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)