Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060437.seq
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        26   0.96 
AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    26   0.96 
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    26   0.96 
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    26   0.96 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.9  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   8.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.9  

>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 453 EGEEKKDDKAIEPPMDPNV 509
           E EE  DD+ +E P++PNV
Sbjct: 162 EDEEYDDDQYLEEPIEPNV 180


>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 354 GTYEPNDDECLN---PWRDDTEE 413
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 354 GTYEPNDDECLN---PWRDDTEE 413
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 354 GTYEPNDDECLN---PWRDDTEE 413
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 162 HKSPSCRSDGIPTPECSSANPRLENSS 242
           H S S  S  +PT   +S  PR   SS
Sbjct: 49  HSSTSASSSSVPTLPTTSGEPRAAGSS 75


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 162 HKSPSCRSDGIPTPECSSANPRLENSS 242
           H S S  S  +PT   +S  PR   SS
Sbjct: 49  HSSTSASSSSVPTLPTTSGEPRAAGSS 75


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 151 IAAITNRLHAEAMASLPPNVRRRIRALRTLQKEF 252
           + A++NR +  A A       + +R LRT  KEF
Sbjct: 64  LPALSNRHNDNATAEYLSCYYQNVRGLRTKTKEF 97


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 264 PQCHKLLLKSSQGADSPTNIR 202
           P CHKL+L S     +P  IR
Sbjct: 173 PPCHKLMLFSGVSVLTPLAIR 193


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 190 ASLPPNVRRRIRALRTLQKE 249
           AS+PPN+   IR  + LQ E
Sbjct: 762 ASIPPNLEEAIRGPQGLQGE 781


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,614
Number of Sequences: 2352
Number of extensions: 12474
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)