Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060436.seq
(598 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 25 0.37
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 25 0.37
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 23 2.6
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 23 2.6
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 22 3.4
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 6.0
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 6.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 6.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 6.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.0
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 238 KWPSPGDGGGQADPARRGV 294
+W SP D +D ARRGV
Sbjct: 124 EWSSPPDARAASDAARRGV 142
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 238 KWPSPGDGGGQADPARRGV 294
+W SP D +D ARRGV
Sbjct: 280 EWSSPPDARAASDAARRGV 298
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = -3
Query: 239 FIHVGVVHDSG----PGVSVARQHIHDPG 165
F+H G+VH+ G P +V+ + PG
Sbjct: 72 FVHSGMVHNDGTQLMPSPTVSGSEMSSPG 100
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = -3
Query: 239 FIHVGVVHDSG----PGVSVARQHIHDPG 165
F+H G+VH+ G P +V+ + PG
Sbjct: 72 FVHSGMVHNDGTQLMPSPTVSGSEMSSPG 100
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 22.2 bits (45), Expect = 3.4
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -3
Query: 308 CALSSTPRRAGSA--CPPPSPGEGHFIHV 228
C S R A + CP PGE FI V
Sbjct: 89 CCQESGEREASVSLFCPKAKPGERKFIKV 117
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 6.0
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 591 ADQLQNLXRAARCRIWGPCSTSGRKGVPTTRRLARSADNST-NW 463
AD+ L CR C+ SG K + LA D T +W
Sbjct: 39 ADEYFRLTTEGDCRDVVRCTKSGLKQITCPSGLAFDIDKQTCDW 82
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTT 162
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 102 PLSVSTSPPGKPATSTA 118
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 190 PGNIFTTPGGKPASLTS 140
P ++ T+P GKPA+ T+
Sbjct: 146 PLSVSTSPPGKPATSTA 162
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,069
Number of Sequences: 336
Number of extensions: 2384
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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