Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060436.seq
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 111 6e-26
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 109 3e-25
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 91 9e-20
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 85 6e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 76 3e-15
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 48 8e-07
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 47 2e-06
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 26 4.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 6.3
SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA synthase|Sc... 25 8.4
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 111 bits (268), Expect = 6e-26
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 188
GQIIPWNFP LM AWK+ PA+A G T+++K AE TPL+AL + + V E GFPPGV+N+L
Sbjct: 165 GQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPPGVINVLS 224
Query: 189 GYG-DTGAAIVDHPDVDKVAFTG 254
G G G AI H D+DKVAFTG
Sbjct: 225 GDGRRCGNAISSHMDIDKVAFTG 247
Score = 95.9 bits (228), Expect = 4e-21
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 254 ATEVGKLIQRGAAST-IKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXG 430
+T VG+++ R AAS+ +K++TLELGGKSPNIV D DL A + +FYN GQ C G
Sbjct: 248 STGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAG 307
Query: 431 SRTFVXDKIYDQFVELSAERANRRVVGTPFRPXVEQGPQI 550
SR +V + +YD+F++ +A VG PF QG Q+
Sbjct: 308 SRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQV 347
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 109 bits (262), Expect = 3e-25
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 188
GQI+PWN+P+ MA WK+ PALA G +++K AE TPL+ LY A LV+EAGFP GVVN++
Sbjct: 159 GQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIIS 218
Query: 189 GYGD-TGAAIVDHPDVDKVAFTG 254
G G G+ + HP +DK+AFTG
Sbjct: 219 GLGTVAGSYMAKHPGIDKIAFTG 241
Score = 87.4 bits (207), Expect = 1e-18
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +2
Query: 254 ATEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXGS 433
+T+VG ++Q+ AAS +K +TLE GGKSP +V D DL +AV+ A + YN GQ C S
Sbjct: 242 STKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNS 301
Query: 434 RTFVXDKIYDQFVELSAERA-NRRVVGTPFRPXVEQGPQI 550
R +V D +YD+F+EL + +VG PF GP +
Sbjct: 302 RIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVV 341
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 91.5 bits (217), Expect = 9e-20
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 188
G I PWNFP+ MA WKL PA+A+G VV+KP+E P + L A + KEAG P GV+N++
Sbjct: 167 GVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGVLNVII 226
Query: 189 GYG-DTGAAIVDHPDVDKVAFTG 254
G G ++GAA+ HP + +AFTG
Sbjct: 227 GSGKESGAALSCHPKIAYLAFTG 249
Score = 76.2 bits (179), Expect = 3e-15
Identities = 37/95 (38%), Positives = 52/95 (54%)
Frame = +2
Query: 266 GKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXGSRTFV 445
GK I AA I +TLELGGKSP I+ D DL A+ +A A+F+N G+ C SR V
Sbjct: 254 GKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRLIV 313
Query: 446 XDKIYDQFVELSAERANRRVVGTPFRPXVEQGPQI 550
+ + D+ + AN+ ++G P V GP +
Sbjct: 314 HESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVV 348
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 85.4 bits (202), Expect = 6e-18
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 GQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLP 188
G I PWNFP M K+G ALA GCTVV++PA +TP TAL +A+L + AG P GV+NM+
Sbjct: 164 GIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVT 223
Query: 189 GY--GDTGAAIVDHPDVDKVAFTG 254
+ G + +P + KV+FTG
Sbjct: 224 ANSPSEHGIELTTNPLIRKVSFTG 247
Score = 80.2 bits (189), Expect = 2e-16
Identities = 38/99 (38%), Positives = 58/99 (58%)
Frame = +2
Query: 254 ATEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXGS 433
+T VGK++ + ++ST+K+++LELGG +P IV D DL +A +A F GQ C +
Sbjct: 248 STNVGKILAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCAN 307
Query: 434 RTFVXDKIYDQFVELSAERANRRVVGTPFRPXVEQGPQI 550
R +V +YD FV+L ER ++ +G V GP I
Sbjct: 308 RIYVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLI 346
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 76.2 bits (179), Expect = 3e-15
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 194
I PWNFP M A K G ALA GCT + PA +TP L + +L +EAGFP GV+N++
Sbjct: 161 ITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGFPDGVLNVITSS 220
Query: 195 GDT--GAAIVDHPDVDKVAFTG 254
+ G + +P V KV+FTG
Sbjct: 221 DASAHGKELTTNPIVRKVSFTG 242
Score = 72.5 bits (170), Expect = 4e-14
Identities = 37/99 (37%), Positives = 55/99 (55%)
Frame = +2
Query: 254 ATEVGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXGS 433
+T VGK++ +ASTIK++++ELGG +P IV D + +AVE+ F + GQ C +
Sbjct: 243 STNVGKILMGQSASTIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPN 302
Query: 434 RTFVXDKIYDQFVELSAERANRRVVGTPFRPXVEQGPQI 550
R +V +YD+FV E+ VG F GP I
Sbjct: 303 RVYVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLI 341
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 48.4 bits (110), Expect = 8e-07
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTALYIAQLVKEAGFPPGVVNMLPGY 194
I P+NF + P L G V+MKP++ L++ + Q+ +EAG P G + +PG
Sbjct: 189 ITPFNFTAIAGNLAAAPLLM-GNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGD 247
Query: 195 G-DTGAAIVDHPDVDKVAFTG 254
+ +HP+ + FTG
Sbjct: 248 AVEVSKVCFNHPEFAGLHFTG 268
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 46.8 bits (106), Expect = 2e-06
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +2
Query: 263 VGKLIQRGAASTIKRITLELGGKSPNIVLADTDLPRAVEAAHNALFYNMGQCCXXGSRTF 442
+ KL+ AA + + LELGGK P I+ D L + +F + GQ C R
Sbjct: 221 IAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERII 280
Query: 443 VXDKIYDQFVELSAERANRRVVGTPFRPXVEQGPQI 550
D +YD + R + +G + V+ G +
Sbjct: 281 ALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMV 316
Score = 33.5 bits (73), Expect = 0.024
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 15 IIPWNFPILMAAWKLGPALATGCTVVMKPAEQTP-LTALY---IAQLVKEAGFPPGVVNM 182
++ WN+P+ A + AL G +V+K +E T T Y + L++ G P +V
Sbjct: 134 LVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQC 193
Query: 183 LPGYGDTGAAIVDHPDVDKVAFTG 254
+ D + H + + F G
Sbjct: 194 ITCLPDVADHLTSHSGIKHITFIG 217
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -1
Query: 409 HVVEERVV---RGLHGARQVGVGQHD 341
HVVE + RG+HG + G+ QHD
Sbjct: 649 HVVERPCIHSLRGIHGQQDGGLEQHD 674
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 116 RRLLGRLHDHSTTRRQSWPELPSRHQYREVP 24
+ +LG+ D + RR S SRH+Y E P
Sbjct: 35 KTVLGKGKDSNHDRRTSTDTTHSRHRYPETP 65
>SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 447
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 8 RSDNTMELPYIDG--GLEARASSGDGLYCGH 94
+ D T E PY+DG LE + DG Y +
Sbjct: 195 KPDLTSEYPYVDGHFSLECYVKALDGAYANY 225
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,095,474
Number of Sequences: 5004
Number of extensions: 36099
Number of successful extensions: 121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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