Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060434.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009994-1|AAQ22463.1|  653|Drosophila melanogaster RE35867p pro...    35   0.12 
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.4  
X51937-1|CAA36201.1|  984|Drosophila melanogaster protein ( Dros...    29   5.9  
X15469-1|CAA33496.1|  633|Drosophila melanogaster protein ( Dros...    29   5.9  
BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p pro...    29   7.8  
AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p pro...    29   7.8  
AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA...    29   7.8  

>BT009994-1|AAQ22463.1|  653|Drosophila melanogaster RE35867p
           protein.
          Length = 653

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 426 CDSNTAQYERNRSFGHLVHALGRAAGGAXN-PSAGLCLNA-SKAEASLAESGKDM 584
           C+S TA    N S       L +AAG A N PS+G  LNA  K  A+L+E  +D+
Sbjct: 63  CNSGTAMIHANNSNLIAAGHLAQAAGPAHNAPSSGSALNAVDKRNANLSEPDQDL 117


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 497 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 405
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>X51937-1|CAA36201.1|  984|Drosophila melanogaster protein (
           Drosophila melanogasterNOF-FB transposable element. ).
          Length = 984

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 652 NAKTRLVKSHCLEPPDSR-GSTVSISLPDS 566
           N  + ++K HCL  PD + G  +S+S+PD+
Sbjct: 107 NDCSSILKGHCLVKPDEQCGIMISVSVPDT 136


>X15469-1|CAA33496.1|  633|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for complete foldback (FB)
           transposable n.  ).
          Length = 633

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 652 NAKTRLVKSHCLEPPDSR-GSTVSISLPDS 566
           N  + ++K HCL  PD + G  +S+S+PD+
Sbjct: 179 NDCSSILKGHCLVKPDEQCGIMISVSVPDT 208


>BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 468 GHLVHALGRAAGGAXNPSAGLCLNASKAEASLAES 572
           G + HA G AAG   N +  +  NAS A   +A +
Sbjct: 340 GDVAHAAGNAAGDVANAAGNVAGNASNAAGDVASA 374


>AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 468 GHLVHALGRAAGGAXNPSAGLCLNASKAEASLAES 572
           G + HA G AAG   N +  +  NAS A   +A +
Sbjct: 265 GDVAHAAGNAAGDVANAAGNVAGNASNAAGDVASA 299


>AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 468 GHLVHALGRAAGGAXNPSAGLCLNASKAEASLAES 572
           G + HA G AAG   N +  +  NAS A   +A +
Sbjct: 353 GDVAHAAGNAAGDVANAAGNVAGNASNAAGDVASA 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,850,838
Number of Sequences: 53049
Number of extensions: 631816
Number of successful extensions: 1608
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)