Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060431.seq
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 120 6e-27
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 120 6e-27
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 120 6e-27
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 120 6e-27
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 118 3e-26
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 33 0.70
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 33 1.2
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV +GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 77.4 bits (182), Expect = 4e-14
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +2
Query: 71 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 250
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 251 G 253
G
Sbjct: 73 G 73
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 200
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 201 QRMRAG 206
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 160 EVPELPLVVEDKVEGYKKTKEAVLLLK 186
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 6e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 6e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE P P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLK 172
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 118 bits (283), Expect = 3e-26
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 79.0 bits (186), Expect = 1e-14
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 253
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Score = 56.0 bits (129), Expect = 1e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +3
Query: 453 SVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXVYKS 632
++AA+ +PALV ++GH IE FP P + K + + +LKAW+DI VY S
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 633 QRLRAG 650
QR+RAG
Sbjct: 187 QRMRAG 192
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLR 589
+ PELPLVV DKV+ KTK+AV+ L+
Sbjct: 146 EFPELPLVVEDKVEGYKKTKEAVLLLK 172
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.5 bits (73), Expect = 0.70
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 282 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 446
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 447 GGSVAATGVPA 479
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 235 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 408
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,852,775
Number of Sequences: 237096
Number of extensions: 2178686
Number of successful extensions: 6493
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6359
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -