Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060431.seq
(673 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 116 4e-26
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 116 4e-26
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 116 4e-26
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 116 4e-26
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 116 4e-26
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 31 1.1
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 31 1.1
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 31 1.1
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 31 1.1
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.9
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.4
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 116 bits (278), Expect = 4e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 74.9 bits (176), Expect = 9e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 247
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 248 AG 253
AG
Sbjct: 61 AG 62
Score = 60.9 bits (141), Expect = 2e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 444 LGGSVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXV 623
L ++AA+GVPALVQ++GH+I+ FP + + ++ + + RLK W+DI V
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 624 YKSQRLRAG 650
YKSQR RAG
Sbjct: 187 YKSQRFRAG 195
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLR 589
+ E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLR 175
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 116 bits (278), Expect = 4e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 2 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 444 LGGSVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDI 614
L ++AA+GVPALVQ++GH+I+ FP + + ++ + + RLK W+DI
Sbjct: 65 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADI 121
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLR 589
+ E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 88 VSEFPLVVSDEVQKVQKTKQAVIFLR 113
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 116 bits (278), Expect = 4e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 74.9 bits (176), Expect = 9e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 247
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 248 AG 253
AG
Sbjct: 61 AG 62
Score = 60.9 bits (141), Expect = 2e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 444 LGGSVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXV 623
L ++AA+GVPALVQ++GH+I+ FP + + ++ + + RLK W+DI V
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 624 YKSQRLRAG 650
YKSQR RAG
Sbjct: 187 YKSQRFRAG 195
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLR 589
+ E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLR 175
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 116 bits (278), Expect = 4e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 74.9 bits (176), Expect = 9e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 247
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 248 AG 253
AG
Sbjct: 61 AG 62
Score = 60.9 bits (141), Expect = 2e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 444 LGGSVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXV 623
L ++AA+GVPALVQ++GH+I+ FP + + ++ + + RLK W+DI V
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 624 YKSQRLRAG 650
YKSQR RAG
Sbjct: 187 YKSQRFRAG 195
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLR 589
+ E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLR 175
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 116 bits (278), Expect = 4e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 411
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 74.9 bits (176), Expect = 9e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 247
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 248 AG 253
AG
Sbjct: 61 AG 62
Score = 60.9 bits (141), Expect = 2e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 444 LGGSVAATGVPALVQARGHIIERFPSFPWL*PTKSKRSTRPNRLSSS*GRLKAWSDILXV 623
L ++AA+GVPALVQ++GH+I+ FP + + ++ + + RLK W+DI V
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 624 YKSQRLRAG 650
YKSQR RAG
Sbjct: 187 YKSQRFRAG 195
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLR 589
+ E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLR 175
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 285 TCCRP-NSACPWWWYS*VRSGC 347
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 285 TCCRP-NSACPWWWYS*VRSGC 347
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 285 TCCRP-NSACPWWWYS*VRSGC 347
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 186
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 186
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,561,858
Number of Sequences: 53049
Number of extensions: 687617
Number of successful extensions: 3740
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -