Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060429.seq
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 119  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 241
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 478 ESLEAITTIPLPFERRLKLNRRAQHPP 398
           E L+ +   P P  R  K++RR   PP
Sbjct: 242 EQLKELENPPTPKPRPTKVSRRKPRPP 268


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 104 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 134


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 491 SVSVGIPGGNHHDSASFRTTSKTESTSSAPS 399
           SVS   PG     +AS   +S   STSS  S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 207 CKSESPW*APVGSXPC 160
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,992
Number of Sequences: 336
Number of extensions: 3064
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)