Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060429.seq
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 190 9e-49
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 190 1e-48
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 187 8e-48
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 186 1e-47
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 153 1e-37
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 83 3e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 83 3e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 82 5e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 80 2e-15
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 78 6e-15
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 9e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 55 5e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 54 1e-07
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 52 3e-07
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 48 7e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 43 3e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 0.001
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 33 0.28
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.1
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 29 2.6
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.6
SB_35566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_56185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.5
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 28 6.0
SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2) 28 7.9
SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28) 28 7.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 190 bits (463), Expect = 9e-49
Identities = 99/137 (72%), Positives = 101/137 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 60 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIMNT+SVV K
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 125 bits (302), Expect = 3e-29
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 58
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 190 bits (462), Expect = 1e-48
Identities = 98/137 (71%), Positives = 101/137 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 332
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIMNT+SVV K
Sbjct: 333 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 392
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 393 VEPYNATLSVHQLVENT 409
Score = 130 bits (315), Expect = 8e-31
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2
Query: 53 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 232
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 233 NEASGGK 253
NEA+GGK
Sbjct: 265 NEATGGK 271
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 187 bits (455), Expect = 8e-48
Identities = 97/137 (70%), Positives = 100/137 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 5 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 64
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGM TLLI KIREEYPDRIMNT+SVV K
Sbjct: 65 VRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTV 124
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 125 VEPYNATLSVHQLVENT 141
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 186 bits (454), Expect = 1e-47
Identities = 94/137 (68%), Positives = 101/137 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIMNT+S+V K
Sbjct: 120 VRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 123 bits (296), Expect = 2e-28
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 58
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 153 bits (371), Expect = 1e-37
Identities = 72/119 (60%), Positives = 89/119 (74%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV
Sbjct: 16 VPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDV 75
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQ 612
+RKEAE+ G+ SG+GTL++ KIREEYPDRI++ +SVV K T+
Sbjct: 76 LRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPKVRTK 134
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 125 bits (302), Expect = 3e-29
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 58
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 354
VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 60 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDR 121
Query: 436 VRKEAE 453
+RK A+
Sbjct: 122 IRKLAD 127
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 436 VRKEAE 453
+RK A+
Sbjct: 555 IRKLAD 560
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 493
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 647 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDR 706
Query: 436 VRKEAE 453
+RK A+
Sbjct: 707 IRKLAD 712
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 436 VRKEAE 453
+RK A+
Sbjct: 186 IRKLAD 191
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 572
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 124
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 81.8 bits (193), Expect = 5e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 436 VRKEAE 453
+RK A+
Sbjct: 121 IRKLAD 126
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 59
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 436 VRKEAE 453
+RK A+
Sbjct: 926 IRKLAD 931
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 436 VRKEAE 453
+RK A+
Sbjct: 493 LRKLAD 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGK 431
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 864
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 62 VPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDR 121
Query: 436 VRKEAE 453
+RK A+
Sbjct: 122 LRKLAD 127
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 436 VRKEAE 453
+RK A+
Sbjct: 540 IRKLAD 545
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD
Sbjct: 47 VPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDR 106
Query: 436 VRKEAE 453
+RK A+
Sbjct: 107 LRKLAD 112
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 478
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 125 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 45
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 121
Query: 436 VRKEAE 453
RK A+
Sbjct: 122 CRKLAD 127
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 78.2 bits (184), Expect = 6e-15
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +1
Query: 358 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIF 537
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+ G SG+G+LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 538 KIREEYPDRIMNTYSVV 588
KIREEYPDR+++++ V+
Sbjct: 62 KIREEYPDRLVSSFCVL 78
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 588 PSPKVSDTVVXPXNATL 638
PSP VS+TV P NATL
Sbjct: 79 PSPLVSETVTEPYNATL 95
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD
Sbjct: 27 VPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDR 86
Query: 436 VRKEAE 453
+RK A+
Sbjct: 87 IRKLAD 92
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/63 (49%), Positives = 46/63 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D
Sbjct: 973 VPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDK 1032
Query: 436 VRK 444
+RK
Sbjct: 1033 IRK 1035
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 298 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 453
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 64
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 304 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 453
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 52
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 304 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 444
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +1
Query: 304 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 453
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 52
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 304 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK-EAESW*LPPGIP 480
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK ++ P +P
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKLVGINYQQPTAVP 62
Query: 481 TDTLAR 498
LA+
Sbjct: 63 GGDLAK 68
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 62 VPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLDR 111
Query: 436 VRKEAE 453
+RK A+
Sbjct: 112 LRKLAD 117
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 253
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 262 RAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 432
RA+ +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 433 VVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPD 561
+V++E E G T SG+G + +R+ YP+
Sbjct: 127 LVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPN 169
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDE 160
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 247
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 248 GK 253
GK
Sbjct: 254 GK 255
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 137 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 238
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +1
Query: 262 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE--LVDSVLDV 435
RA+L+D+E G ++++ GP +F + SG GNNW YT + + + V
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW----YTLLCKCFAIRKDIFV 131
Query: 436 VRKEAESW*LPPGIPTDTL--ARRXHRSGMGTLLIFKIREEYPD 561
V + + W L L + SG+GT ++ + ++YPD
Sbjct: 132 VVQSFKEWTLCFEAKEMYLEDQNKGTGSGVGTYVLNLLHDDYPD 175
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 511 SGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQXLXRXTPHFLVHQLVXKT 666
SG+GTL+++ ++EEYPDRI+++ SV + + VHQL+ T
Sbjct: 26 SGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETT 77
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 461 DCLQGFQLTHSLGGGT 508
D +QGFQL HSLGGGT
Sbjct: 9 DAIQGFQLLHSLGGGT 24
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/89 (22%), Positives = 37/89 (41%)
Frame = -2
Query: 461 HHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGS 282
HH + T+++T + +P CP + P +T + C P + +P S
Sbjct: 225 HHPVQTLPTSARTNTAHISPYKHCPHHPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTS 284
Query: 281 KSTRMARGTTCRRRLHCSIH*CAPTASQS 195
T A + C+ H + PT+S++
Sbjct: 285 ARTNTAHISPCKHCPHQPVQ-TLPTSSRA 312
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 455 DSASFRTTSKTESTSSAPSV*CPLAQL 375
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 456 RFRFLSNDV*N*IDELSTLRVVSLGPVVTGAGLSEDEVVRTEDLSERSRADRVHGAGL 283
R R +S V I +L V++L PV+ G +++D V + RSR R H G+
Sbjct: 210 RGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRHRCGI 267
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 392 CPLAQLLPAPDCPKTKLSGRKICP 321
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 392 CPLAQLLPAPDCPKTKLSGRKICP 321
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 392 CPLAQLLPAPDCPKTKLSGRKICP 321
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_35566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 576 CVHYSVRVLF-SDFEDEKGAHTGTVPPPSECVSWN 475
C H + +LF +D+ E G H VP SE SWN
Sbjct: 150 CAHVAALLLFINDYSSEHG-HMVQVPKTSEPCSWN 183
>SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 576 CVHYSVRVLF-SDFEDEKGAHTGTVPPPSECVSWN 475
C H + +LF +D+ E G H VP SE SWN
Sbjct: 206 CAHVAALLLFINDYSSEHG-HMVQVPKTSEPCSWN 239
>SB_56185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 371 PAPDCPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTTCRRRLH-CSIH*CAPTASQS 195
P P + + R + +GP + GS++T G +RR+H C C ++S
Sbjct: 139 PVPSIVVQQRASRPVS-RGPRSKSTSNTGSRATSPKDGAESKRRVHRCQFSGCRKVYTKS 197
Query: 194 PHGK 183
H K
Sbjct: 198 SHLK 201
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 368 APDCPKTKLSGRKICPKGPERTESMVPGSKST 273
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 520 PYRNGAXAERVCQLESLE-AITTIPLPFERR--LKLNRRAQHPP 398
PYRNG E C+ SL A+ +E +LNR A HPP
Sbjct: 23 PYRNGDPLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPP 66
>SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2)
Length = 436
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Frame = -2
Query: 500 RRASVSVGIPGGNHHDSASFRTTSKTESTSS-APSV*CPLAQLLPAPDCPKTKLSGRKIC 324
RR+ + + G H D A +RT+S S +P + LPA +
Sbjct: 129 RRSKYNQNLVEGMHRDEAGYRTSSPMRSQQRVSPGI--ISVNRLPATPARRPAAVTPSRS 186
Query: 323 PKGPERT----ESMVPGSKSTRMARGTT-CRRRLHCSIH*CAPTASQ 198
P+ RT + VP + RG T RR C + P + +
Sbjct: 187 PRSASRTNRRSQGPVPSPRDDLRTRGNTRARRPATCLVRSTTPQSDK 233
>SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28)
Length = 246
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 531 EKGAHTGTVPPPSECVSWNPWRQSP 457
E H PP S V+ NPW+Q P
Sbjct: 136 EAEQHKPATPPQSHYVNSNPWQQPP 160
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,148,573
Number of Sequences: 59808
Number of extensions: 417982
Number of successful extensions: 1212
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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