Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060429.seq
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    90   5e-20
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    90   5e-20
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    90   5e-20
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    90   5e-20
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.72 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.7  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   5.0  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   6.7  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   6.7  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   8.8  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   8.8  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   8.8  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 90.2 bits (214), Expect = 5e-20
 Identities = 51/92 (55%), Positives = 55/92 (59%)
 Frame = +1

Query: 391 HYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIM 570
           HYTEGAELVD+VLDVVRKE E+     G            SGMGTLLI KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 571 NTYSVVHHLKCXTQXLXRXTPHFLVHQLVXKT 666
           NTYSVV   K     +        +HQLV  T
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENT 92


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 90.2 bits (214), Expect = 5e-20
 Identities = 51/92 (55%), Positives = 55/92 (59%)
 Frame = +1

Query: 391 HYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIM 570
           HYTEGAELVD+VLDVVRKE E+     G            SGMGTLLI KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 571 NTYSVVHHLKCXTQXLXRXTPHFLVHQLVXKT 666
           NTYSVV   K     +        +HQLV  T
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENT 92


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 90.2 bits (214), Expect = 5e-20
 Identities = 51/92 (55%), Positives = 55/92 (59%)
 Frame = +1

Query: 391 HYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIM 570
           HYTEGAELVD+VLDVVRKE E+     G            SGMGTLLI KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 571 NTYSVVHHLKCXTQXLXRXTPHFLVHQLVXKT 666
           NTYSVV   K     +        +HQLV  T
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENT 92


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 90.2 bits (214), Expect = 5e-20
 Identities = 51/92 (55%), Positives = 55/92 (59%)
 Frame = +1

Query: 391 HYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIM 570
           HYTEGAELVD+VLDVVRKE E+     G            SGMGTLLI KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 571 NTYSVVHHLKCXTQXLXRXTPHFLVHQLVXKT 666
           NTYSVV   K     +        +HQLV  T
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENT 92


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 80  MREIVHIQAGQCGNQIGAKFWE 145
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%)
 Frame = -2

Query: 347  KLSGRKICPKGPERTESMVPGS-----------KSTRMARGTTCRRRLHCSIH*CAPT-A 204
            +LS  K  PKG E    MVP S           +  R+  GT       CS   C+ T +
Sbjct: 1036 RLSHSKSWPKGTENENYMVPPSPRPVSEELHLVRGVRLGSGTLVGALNRCSNGSCSSTSS 1095

Query: 203  SQSPHGKH 180
            S S H  H
Sbjct: 1096 SHSNHSSH 1103


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +1

Query: 253 VVPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 414
           ++P   +  L  G+ +S     FG  F    RP N+ + ++   NN  + H T  A L
Sbjct: 105 LLPSLAITGLSIGSSNSSFLRQFGPQFTGTKRPQNWFYSRNNNNNNNNEHHNTYNARL 162


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +1

Query: 253 VVPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 414
           ++P   +  L  G+ +S     FG  F    RP N+ + ++   NN  + H T  A L
Sbjct: 105 LLPSLAITGLSIGSSNSRFLRQFGPQFTGTNRPQNWFYSRNNNNNNNNEHHNTYNARL 162


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 352 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 438
           FG    G +   G YT  +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 428 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 315
           K   T +  +  CPL  ++   DC   +L   KI  KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 428 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 315
           K   T +  +  CPL  ++   DC   +L   KI  KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 134 KFWEIISDEHGIDPTG 181
           KFW  + D  GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,378
Number of Sequences: 2352
Number of extensions: 13532
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)