Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060429.seq
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 187 7e-48
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 187 7e-48
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 182 3e-46
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 180 6e-46
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 3e-27
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 84 1e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 84 1e-16
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 80 1e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 80 1e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 80 1e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 80 1e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 78 5e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 78 5e-15
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 77 9e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 77 9e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 77 9e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 77 9e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 77 1e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 4e-12
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 29 3.0
Z46934-5|CAA87043.1| 414|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 29 3.0
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 5.3
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 187 bits (455), Expect = 7e-48
Identities = 95/139 (68%), Positives = 102/139 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIMNT+SVV K
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKTQT 672
+ VHQLV T +
Sbjct: 180 VEPYNATLSVHQLVENTDS 198
Score = 114 bits (275), Expect = 5e-26
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK 58
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 187 bits (455), Expect = 7e-48
Identities = 95/139 (68%), Positives = 102/139 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIMNT+SVV K
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKTQT 672
+ VHQLV T +
Sbjct: 180 VEPYNATLSVHQLVENTDS 198
Score = 114 bits (275), Expect = 5e-26
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK 58
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 182 bits (444), Expect = 2e-46
Identities = 93/137 (67%), Positives = 100/137 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE G SGMGTLLI KIREEYPDRIM+++SVV K
Sbjct: 120 VRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 117 bits (281), Expect = 9e-27
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGK 58
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 182 bits (443), Expect = 2e-46
Identities = 92/137 (67%), Positives = 100/137 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RKEAE G SGMGTLLI KIREEYPDRIM+++SVV K
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 108 bits (260), Expect = 3e-24
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGK 58
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 182 bits (442), Expect = 3e-46
Identities = 94/137 (68%), Positives = 99/137 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAES G SGMGTLLI KIREEYPDRIM T+SVV K
Sbjct: 120 VRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 127 bits (307), Expect = 6e-30
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGK 58
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 180 bits (439), Expect = 6e-46
Identities = 91/137 (66%), Positives = 100/137 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RKEAE G SGMGTLLI KIREE+PDRIM+++SVV K
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLVXKT 666
+ VHQLV T
Sbjct: 180 VEPYNATLSVHQLVENT 196
Score = 109 bits (263), Expect = 1e-24
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGK 58
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (285), Expect = 3e-27
Identities = 57/118 (48%), Positives = 83/118 (70%)
Frame = +1
Query: 247 RQVVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 426
R+ VPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Query: 427 LDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLK 600
L V+R+EAE+ G SG+G+LLI K+REEY D+ ++T S++ K
Sbjct: 117 LSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK 58
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 588 PSPKVSDTVVXPXNATL 638
PS KVSDTVV P NA L
Sbjct: 171 PSAKVSDTVVEPYNAIL 187
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (285), Expect = 3e-27
Identities = 57/118 (48%), Positives = 83/118 (70%)
Frame = +1
Query: 247 RQVVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 426
R+ VPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Query: 427 LDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLK 600
L V+R+EAE+ G SG+G+LLI K+REEY D+ ++T S++ K
Sbjct: 117 LSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK 58
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 588 PSPKVSDTVVXPXNATL 638
PS KVSDTVV P NA L
Sbjct: 171 PSAKVSDTVVEPYNAIL 187
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +1
Query: 220 QCILQ*SLRRQVVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 399
Q S+ + VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 400 EGAELVDSVLDVVRKEAES 456
G EL+D VLD +RK+ E+
Sbjct: 113 IGKELIDVVLDRIRKQTEN 131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGK 253
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGK 63
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 426
VPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 62 VPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
Query: 427 LDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSV 585
+D++ +EAE+ GI SG G+LL+ ++RE +P +++ TYSV
Sbjct: 121 MDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSV 173
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 232
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 426
VPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 62 VPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
Query: 427 LDVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSV 585
+D++ +EAE+ GI SG G+LL+ ++RE +P +++ TYSV
Sbjct: 121 MDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSV 173
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 232
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGR 58
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGR 58
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGR 58
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGR 58
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 62 VPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDR 121
Query: 436 VRKEAE 453
VR+ E
Sbjct: 122 VRRLTE 127
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 253
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 78.2 bits (184), Expect = 5e-15
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGR 58
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 78.2 bits (184), Expect = 5e-15
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 120 IRRLADN 126
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGR 58
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 122 IRRLADN 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 77.4 bits (182), Expect = 9e-15
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 121 IRRLADN 127
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 59
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 122 IRRLADN 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 436 VRKEAES 456
+R+ A++
Sbjct: 122 IRRLADN 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 436 VRKEAES 456
VR+ E+
Sbjct: 127 VRRLVEN 133
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 247
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 248 GK 253
GK
Sbjct: 64 GK 65
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD
Sbjct: 59 VPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDR 118
Query: 436 VRKEAES 456
+R+ A +
Sbjct: 119 IRRLANN 125
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 181
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 436 VRKEAES 456
V++ AE+
Sbjct: 128 VKRLAEN 134
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 253
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 40 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 99
Query: 436 VRKEAES 456
V++ AE+
Sbjct: 100 VKRLAEN 106
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
F52G2.2a protein.
Length = 1319
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 525 GAHTGTVPPPSECVSWNPWRQSPRFRFLSNDV*N*IDELSTL 400
GA +G +PPPS S+N P + +SND + +L+ L
Sbjct: 1230 GAPSGPLPPPSSQSSFNGAPAPPHYSEMSNDYNRMVRKLAEL 1271
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
F52G2.2b protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 525 GAHTGTVPPPSECVSWNPWRQSPRFRFLSNDV*N*IDELSTL 400
GA +G +PPPS S+N P + +SND + +L+ L
Sbjct: 1040 GAPSGPLPPPSSQSSFNGAPAPPHYSEMSNDYNRMVRKLAEL 1081
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 357 SEDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHDLPPE 241
S +E + E+L + DR+ GA ++V G+G D+P E
Sbjct: 666 SLEEAKKIENLQSDVKEDRIGGASVRVVALGSGADVPVE 704
>Z46934-5|CAA87043.1| 414|Caenorhabditis elegans Hypothetical
protein ZK1320.5 protein.
Length = 414
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 94 YDFPHFVLFM*TINYLTLKICSARSTHCRSC 2
YDF H +LF+ I L SA+ +H R+C
Sbjct: 176 YDFYHGILFLPCIIISVLMFKSAKGSHTRAC 206
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 357 SEDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHDLPPE 241
S +E + E+L + DR+ GA ++V G+G D+P E
Sbjct: 666 SLEEAKKIENLQSDVKEDRIGGASVRVVALGSGADVPVE 704
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = -2
Query: 449 ASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTESMVPG 285
A R + + S SS+PS CP LL PAP P + G PK + PG
Sbjct: 298 AGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVPEPPG 357
Query: 284 SKST 273
+ T
Sbjct: 358 NMKT 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,734,645
Number of Sequences: 27780
Number of extensions: 303270
Number of successful extensions: 941
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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