Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060429.seq
(675 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 177 6e-45
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 177 6e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 177 7e-45
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 177 7e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 176 1e-44
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 175 2e-44
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 175 3e-44
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 173 7e-44
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 173 7e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 85 3e-17
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 85 3e-17
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 85 3e-17
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 85 3e-17
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 85 3e-17
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 85 3e-17
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 82 4e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 70 1e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 70 2e-12
At4g37190.1 68417.m05265 expressed protein 31 0.93
At3g01140.1 68416.m00018 myb family transcription factor (MYB106... 29 3.8
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 3.8
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 28 6.6
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.7
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (431), Expect = 6e-45
Identities = 90/134 (67%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 106 bits (255), Expect = 1e-23
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGK 58
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 177 bits (431), Expect = 6e-45
Identities = 90/134 (67%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 104 bits (249), Expect = 6e-23
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGR 58
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (430), Expect = 7e-45
Identities = 90/134 (67%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 109 bits (261), Expect = 2e-24
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGK 58
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 177 bits (430), Expect = 7e-45
Identities = 90/134 (67%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 105 bits (252), Expect = 3e-23
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGR 58
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 176 bits (429), Expect = 1e-44
Identities = 89/134 (66%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 181 VEPYNATLSVHQLV 194
Score = 108 bits (260), Expect = 3e-24
Identities = 48/59 (81%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGR 59
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 175 bits (426), Expect = 2e-44
Identities = 88/134 (65%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 181 VEPYNATLSVHQLV 194
Score = 113 bits (271), Expect = 1e-25
Identities = 48/59 (81%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGK 253
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGR 59
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 175 bits (425), Expect = 3e-44
Identities = 89/134 (66%), Positives = 98/134 (73%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 60 VPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 110 bits (264), Expect = 9e-25
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGR 58
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 173 bits (422), Expect = 7e-44
Identities = 88/134 (65%), Positives = 97/134 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 111 bits (266), Expect = 5e-25
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 173 bits (422), Expect = 7e-44
Identities = 88/134 (65%), Positives = 97/134 (72%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
VRKEAE+ G SGMGTLLI KIREEYPDR+M T+SV K
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 616 LXRXTPHFLVHQLV 657
+ VHQLV
Sbjct: 180 VEPYNATLSVHQLV 193
Score = 111 bits (266), Expect = 5e-25
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 253
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEY 555
VRK A++ G SG+G+LL+ ++ +Y
Sbjct: 122 VRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 161
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEY 555
VRK A++ G SG+G+LL+ ++ +Y
Sbjct: 122 VRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 161
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/137 (33%), Positives = 72/137 (52%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RK A++ G SG+G+LL+ ++ +Y + ++V + T
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 616 LXRXTPHFLVHQLVXKT 666
+ H L+ T
Sbjct: 182 VEPYNSVLSTHSLLEHT 198
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/137 (33%), Positives = 72/137 (52%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RK A++ G SG+G+LL+ ++ +Y + ++V + T
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 616 LXRXTPHFLVHQLVXKT 666
+ H L+ T
Sbjct: 182 VEPYNSVLSTHSLLEHT 198
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/137 (33%), Positives = 72/137 (52%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RK A++ G SG+G+LL+ ++ +Y + ++V + T
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 616 LXRXTPHFLVHQLVXKT 666
+ H L+ T
Sbjct: 182 VEPYNSVLSTHSLLEHT 198
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/137 (33%), Positives = 72/137 (52%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 435
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 436 VRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSVVHHLKCXTQX 615
+RK A++ G SG+G+LL+ ++ +Y + ++V + T
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 616 LXRXTPHFLVHQLVXKT 666
+ H L+ T
Sbjct: 182 VEPYNSVLSTHSLLEHT 198
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/102 (38%), Positives = 63/102 (61%)
Frame = +1
Query: 250 QVVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 429
Q VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L
Sbjct: 60 QHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCL 119
Query: 430 DVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEY 555
+ +RK A++ G SG+G+LL+ ++ ++
Sbjct: 120 ERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDF 161
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 429
+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 430 DVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSV 585
D++ +EA+ G SGMG+ L+ + + Y +++ TYSV
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSV 171
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 241
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +1
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 429
+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 430 DVVRKEAESW*LPPGIPTDTLARRXHRSGMGTLLIFKIREEYPDRIMNTYSV 585
D++ +EA+ G SGMG+ L+ + + Y +++ TYSV
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSV 171
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 241
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 169
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g01140.1 68416.m00018 myb family transcription factor (MYB106)
similar to transforming protein (myb) homolog GB:S26605
from [Petunia x hybrida]
Length = 345
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 337 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESW*LPPGIPTDTLARRXHRSG 516
P F Q NW K + G + ++S V +E+ +P GIPTD+ R + +
Sbjct: 187 PQQHCFTQK-TSTNWTKPNQGNGDQQLESPTSTVTF-SENLLMPLGIPTDSSRNRNNNNN 244
Query: 517 MGTLLI 534
+ +I
Sbjct: 245 ESSAMI 250
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = -2
Query: 560 SGYSSLILKMRRVPIPERCXRRASVSVGIPGGNHHDSASFRTTSKTESTSSAPSV*CPLA 381
S S+ +++ P+ R S S G N+ S T+ + S S +
Sbjct: 66 SSSGSVTGRIKHAPVIGRSNSVRSQSNSSSGNNNLRPRSDSATTSSSSHSQPLLSSSSSS 125
Query: 380 QLLPAPDCPKTKLSGRKICPKGPERTESMVPG-SKSTRMARGT 255
PAP P L ICP G + M S+S + GT
Sbjct: 126 ATSPAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 464 NHHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLS 339
N + S TTS+T+ST S+P P L +P P +S
Sbjct: 272 NETEDHSETTTSETDSTESSPKEDVPPPPPLTSPQTPSPTVS 313
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 86 EIVHIQAGQCGNQIGAKFWEIISD 157
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,971,037
Number of Sequences: 28952
Number of extensions: 284392
Number of successful extensions: 837
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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