Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060428.seq
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    86   8e-19
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    86   8e-19
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    86   8e-19
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    86   8e-19
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     29   0.10 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.71 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   8.7  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   8.7  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 44/61 (72%), Positives = 47/61 (77%)
 Frame = +2

Query: 392 HYTEGAELVDSVLDVVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRI 571
           HYTEGAELVD+VLDVVRKE E+CD   G    T +  GG  SGMG LLISKIREEYPDRI
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRI 59

Query: 572 M 574
           M
Sbjct: 60  M 60



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 32/68 (47%), Positives = 33/68 (48%)
 Frame = +3

Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
           CLQGFQLTHSLG      +                  NTYSVVPSPKVSDTV       T
Sbjct: 25  CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTYSVVPSPKVSDTVVEPYNA-T 82

Query: 645 FSFINLVE 668
            S   LVE
Sbjct: 83  LSIHQLVE 90


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 44/61 (72%), Positives = 47/61 (77%)
 Frame = +2

Query: 392 HYTEGAELVDSVLDVVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRI 571
           HYTEGAELVD+VLDVVRKE E+CD   G    T +  GG  SGMG LLISKIREEYPDRI
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRI 59

Query: 572 M 574
           M
Sbjct: 60  M 60



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 32/68 (47%), Positives = 33/68 (48%)
 Frame = +3

Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
           CLQGFQLTHSLG      +                  NTYSVVPSPKVSDTV       T
Sbjct: 25  CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTYSVVPSPKVSDTVVEPYNA-T 82

Query: 645 FSFINLVE 668
            S   LVE
Sbjct: 83  LSIHQLVE 90


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 44/61 (72%), Positives = 47/61 (77%)
 Frame = +2

Query: 392 HYTEGAELVDSVLDVVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRI 571
           HYTEGAELVD+VLDVVRKE E+CD   G    T +  GG  SGMG LLISKIREEYPDRI
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRI 59

Query: 572 M 574
           M
Sbjct: 60  M 60



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 32/68 (47%), Positives = 33/68 (48%)
 Frame = +3

Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
           CLQGFQLTHSLG      +                  NTYSVVPSPKVSDTV       T
Sbjct: 25  CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTYSVVPSPKVSDTVVEPYNA-T 82

Query: 645 FSFINLVE 668
            S   LVE
Sbjct: 83  LSIHQLVE 90


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 44/61 (72%), Positives = 47/61 (77%)
 Frame = +2

Query: 392 HYTEGAELVDSVLDVVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRI 571
           HYTEGAELVD+VLDVVRKE E+CD   G    T +  GG  SGMG LLISKIREEYPDRI
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRI 59

Query: 572 M 574
           M
Sbjct: 60  M 60



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 32/68 (47%), Positives = 33/68 (48%)
 Frame = +3

Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
           CLQGFQLTHSLG      +                  NTYSVVPSPKVSDTV       T
Sbjct: 25  CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTYSVVPSPKVSDTVVEPYNA-T 82

Query: 645 FSFINLVE 668
            S   LVE
Sbjct: 83  LSIHQLVE 90


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 29.5 bits (63), Expect = 0.10
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -3

Query: 567 LSGYSSLILEMRRXPIPETGPPARASVSVGIPGGKSHDSASFRTTSKTESTSSAP 403
           L+G S++ L +   P+P   PP+    S+G+PG   + S    T  ++ STS  P
Sbjct: 341 LTGSSNVFLPVVTAPLPGPSPPS----SLGMPGNIPNLSQLDATGGQSASTSGLP 391


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 80  MREIVHIQAGQCGNQIGAKFWE 145
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 134 KFWEIISDEHGIDPTG 181
           KFW  + D  GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 FGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
           FG    G +   G YT  +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,199
Number of Sequences: 2352
Number of extensions: 12741
Number of successful extensions: 55
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)