Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060428.seq
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 301 4e-82
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 291 2e-79
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 285 1e-77
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 285 1e-77
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 283 1e-76
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 282 1e-76
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 198 3e-51
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 198 3e-51
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 131 4e-31
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 131 4e-31
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 131 5e-31
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 129 2e-30
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 129 2e-30
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 126 1e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 126 2e-29
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 126 2e-29
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 126 2e-29
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 125 3e-29
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 125 3e-29
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 124 8e-29
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 118 4e-27
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 118 4e-27
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 103 1e-22
Z50006-5|CAA90300.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.18
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 29 3.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 301 bits (738), Expect = 4e-82
Identities = 142/165 (86%), Positives = 149/165 (90%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG+ V
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAESCD G T + GG SGMG LLISKIREEYPDRIM
Sbjct: 121 RKEAESCDCLQGFQM-THSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/68 (42%), Positives = 32/68 (47%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQ+THSLG + T+SVVPSPKVSDTV T
Sbjct: 129 CLQGFQMTHSLGGGTGSGMGTLLISKIREEYP-DRIMMTFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 291 bits (715), Expect = 2e-79
Identities = 136/165 (82%), Positives = 145/165 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG+ V
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQ GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAE CD G T + GG SGMG LLISKIREEYPDRIM
Sbjct: 121 RKEAEGCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQLTHSLG + +++SVVPSPKVSDTV T
Sbjct: 129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMSSFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 285 bits (700), Expect = 1e-77
Identities = 135/165 (81%), Positives = 144/165 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA + V
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQ GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAES D G T + GG SGMG LLISKIREEYPDRIM
Sbjct: 121 RKEAESTDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/68 (45%), Positives = 33/68 (48%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQLTHSLG + NT+SVVPSPKVSDTV T
Sbjct: 129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 285 bits (700), Expect = 1e-77
Identities = 135/165 (81%), Positives = 144/165 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA + V
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQ GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAES D G T + GG SGMG LLISKIREEYPDRIM
Sbjct: 121 RKEAESTDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/68 (45%), Positives = 33/68 (48%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQLTHSLG + NT+SVVPSPKVSDTV T
Sbjct: 129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMNTFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 283 bits (693), Expect = 1e-76
Identities = 130/165 (78%), Positives = 144/165 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G+ V
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQ GAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAE CD G T + GG SGMG LLISKIREEYPDRIM
Sbjct: 121 RKEAEGCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQLTHSLG + +++SVVPSPKVSDTV T
Sbjct: 129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEYP-DRIMSSFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 282 bits (692), Expect = 1e-76
Identities = 130/165 (78%), Positives = 144/165 (87%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G+ V
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQ GAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
RKEAE CD G T + GG SGMG LLISKIREE+PDRIM
Sbjct: 121 RKEAEGCDCLQGFQL-THSLGGGTGSGMGTLLISKIREEFPDRIM 164
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +3
Query: 465 CLQGFQLTHSLGRAARFPVWXXXXXXXXXXXTLTE**NTYSVVPSPKVSDTVSRTVQRHT 644
CLQGFQLTHSLG + +++SVVPSPKVSDTV T
Sbjct: 129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEFP-DRIMSSFSVVPSPKVSDTVVEPYNA-T 186
Query: 645 FSFINLVE 668
S LVE
Sbjct: 187 LSVHQLVE 194
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 198 bits (483), Expect = 3e-51
Identities = 91/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G + V
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAILVDL+P +++ VRS +G++F P+N V G+ GAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
R+EAE+ D G + GG SG+G LLISK+REEY D+ +
Sbjct: 121 RREAEAADSLEGFQL-IHSLGGGTGSGLGSLLISKLREEYSDKTL 164
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 198 bits (483), Expect = 3e-51
Identities = 91/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G + V
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAILVDL+P +++ VRS +G++F P+N V G+ GAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIM 574
R+EAE+ D G + GG SG+G LLISK+REEY D+ +
Sbjct: 121 RREAEAADSLEGFQL-IHSLGGGTGSGLGSLLISKLREEYSDKTL 164
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 131 bits (317), Expect = 4e-31
Identities = 62/160 (38%), Positives = 93/160 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 131 bits (317), Expect = 4e-31
Identities = 62/160 (38%), Positives = 93/160 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 131 bits (316), Expect = 5e-31
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGQDV 259
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ G+ V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
RK+ E+C+ G + GG SG LL+ ++ E+
Sbjct: 126 RKQTENCEGLQGFLV-FHSFGGGTGSGFSSLLMERLSVEF 164
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 129 bits (312), Expect = 2e-30
Identities = 62/160 (38%), Positives = 94/160 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 129 bits (312), Expect = 2e-30
Identities = 62/160 (38%), Positives = 94/160 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 129 bits (311), Expect = 2e-30
Identities = 67/162 (41%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGQ 253
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 254 DVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLD 433
VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 434 VVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
VR+ E C G + GG SG L++ ++ +Y
Sbjct: 121 RVRRLTERCQSLQGF-LIFHSFGGGTGSGFTSLVMERLSIDY 161
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 126 bits (305), Expect = 1e-29
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Frame = +2
Query: 74 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 247
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 248 GQDVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSV 427
G+ VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 428 LDVVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
+D VR+ E+C G + GG SG LL+ ++ +Y
Sbjct: 124 MDRVRRLVENCRGLQGFLV-FHSFGGGTGSGFTALLMERLSVDY 166
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 126 bits (303), Expect = 2e-29
Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGQ 253
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 254 DVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLD 433
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 434 VVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
V++ AE+C+ G + GG SG LL+ ++ EY
Sbjct: 127 RVKRLAENCNGLQGF-VIFHSFGGGTGSGFLSLLMERLSTEY 167
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 126 bits (303), Expect = 2e-29
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 DVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLD 433
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
+R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RIRRLADNCTGLQGFLV-FHSFGGGTGSGFTSLLMERLSVDY 161
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 126 bits (303), Expect = 2e-29
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 DVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLD 433
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
+R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RIRRLADNCTGLQGFLV-FHSFGGGTGSGFTSLLMERLSVDY 161
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 126 bits (303), Expect = 2e-29
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 DVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLD 433
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
+R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RIRRLADNCTGLQGFLV-FHSFGGGTGSGFTSLLMERLSVDY 161
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 125 bits (301), Expect = 3e-29
Identities = 59/160 (36%), Positives = 92/160 (57%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 125 bits (301), Expect = 3e-29
Identities = 59/160 (36%), Positives = 92/160 (57%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 RRLADNCSGLQGFFV-FHSFGGGTGSGFTSLLMERLSVDY 159
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 124 bits (298), Expect = 8e-29
Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 2/161 (1%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQD 256
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDV 436
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 437 VRKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
+R+ A++C G + GG SG LL+ ++ +Y
Sbjct: 121 IRRLADNCTGLQGFLV-FHSFGGGTGSGFTSLLMERLSVDY 160
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 120 bits (289), Expect = 9e-28
Identities = 59/160 (36%), Positives = 93/160 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDV 259
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G+ V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEY 559
R+ A +C+ G + GG SG +L+ ++ EY
Sbjct: 120 RRLANNCEGLQGFFV-FHSFGGGTGSGFTSMLMERLSAEY 158
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 118 bits (284), Expect = 4e-27
Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A VPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--XGAGNNWAKGHYTEGAELVDSVLDVV 439
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIMK 577
+EAE+ + GI T + +GG SG G LL+ ++RE +P ++++
Sbjct: 125 IREAENTNNLDGI-LFTHSVSGGTGSGTGSLLLERLREAFPKKVIQ 169
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 118 bits (284), Expect = 4e-27
Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A VPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--XGAGNNWAKGHYTEGAELVDSVLDVV 439
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 440 RKEAESCDLPPGIPTDTLARAGGPVSGMGXLLISKIREEYPDRIMK 577
+EAE+ + GI T + +GG SG G LL+ ++RE +P ++++
Sbjct: 125 IREAENTNNLDGI-LFTHSVSGGTGSGTGSLLLERLREAFPKKVIQ 169
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 103 bits (247), Expect = 1e-22
Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Frame = +2
Query: 158 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGQDVPRAILVDLEPGTMDSVRSGPFGQ 328
EHGI P G YH + D + E IN ++ E +GG+ VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 329 IFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDLPPGIPTDTLARAGG 508
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ G + GG
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF-VIFHSFGGG 122
Query: 509 PVSGMGXLLISKIREEY 559
SG LL+ ++ EY
Sbjct: 123 TGSGFLSLLMERLSTEY 139
>Z50006-5|CAA90300.1| 301|Caenorhabditis elegans Hypothetical
protein T07C5.4 protein.
Length = 301
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -2
Query: 622 LTVSDTLGDGTTEYVFHYSVRVLFSDFG------DEEXSHTGNRAARPSECVSWNPWRQI 461
L S TL D T E F+YS +++ DF E + A EC W QI
Sbjct: 87 LISSLTLLDSTKESTFYYSTKIVPIDFHLDNLFEQESLKYLDKPAGLHFECFDWGLMSQI 146
Query: 460 TRFRFLSN 437
T +L N
Sbjct: 147 TAIEYLKN 154
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 564 SGYSSLILEMRRXPIPETGPPARASVSVGIPGGKSHDSASFRTTSKTESTSSAPS 400
S S L P +GP + +V G S S S ++T+ STSS PS
Sbjct: 510 STVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPS 564
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 146 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQDVPRAILVDL 283
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,893
Number of Sequences: 27780
Number of extensions: 283847
Number of successful extensions: 974
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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