Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060427.seq
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   2.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   3.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.7  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   8.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   8.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.9  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 269 WVCSKYTHSRRHCTLHGITNLQGQG 343
           WVC  Y  SR + +  G  N  G G
Sbjct: 203 WVCIAYHESRFNTSAEGRLNADGSG 227



 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 269 WVCSKYTHSRRHCTLHGITNLQGQG 343
           WVC  Y  SR + +  G  N  G G
Sbjct: 367 WVCIAYHESRFNTSAEGRLNADGSG 391


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 265 LLGMFQIHTQPQTLYSP 315
           L+  F+IH+ P+T Y P
Sbjct: 705 LINHFKIHSHPRTAYGP 721


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 265 LLGMFQIHTQPQTLYSP 315
           L+  F+IH+ P+T Y P
Sbjct: 706 LINHFKIHSHPRTAYGP 722


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 163 VNTCREISLNLKLPGEIWQLAHQETIFNRFLHFTLLGMFQIH 288
           VN C E+    + P  +W+ +  +T+F   +  +L G+   H
Sbjct: 496 VNKC-ELMYLCQPPARLWRSSQTQTLFLVLVFVSLFGVLLTH 536


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 94  ETEYQGTMDILGRSLKPEKTDWS 162
           E  +QG   ++  +L+   TDWS
Sbjct: 114 EGSFQGLKQLVNLTLRTHNTDWS 136


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 215 GNWPIKKPSSTDFYILRYWVCSKYT 289
           GN  +      D Y LR  VCS++T
Sbjct: 435 GNIHLVPSKVNDVYFLRMAVCSRFT 459


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 215 GNWPIKKPSSTDFYILRYWVCSKYT 289
           GN  +      D Y LR  VCS++T
Sbjct: 466 GNIHLVPSKVNDVYFLRMAVCSRFT 490


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 472 MCSHHHPGCCPIPNGVSPTTENPHSSV 392
           MCS   PG   IPN    T    H++V
Sbjct: 445 MCSRKAPGLDGIPNIALKTAIKKHTAV 471


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,322
Number of Sequences: 2352
Number of extensions: 14270
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)