Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060426.seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.3  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   5.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 284 VASIVINKLLENSMK-RISSFKTSNVWVTIFINKI*EYCAEKI 159
           +  +++  +L N    R++S     +W +I I K   +C +K+
Sbjct: 279 IQEVMLFTILWNCQNTRVASEDFKAIWYSILIKKADSFCKKKL 321


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 255 RELHEKNFKLQDK*CLGYNIYK*NLR 178
           R   +KN  +  + CL  N+Y  NLR
Sbjct: 41  RHFFKKNLIVGSENCLVLNVYTKNLR 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,244
Number of Sequences: 336
Number of extensions: 3698
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)