Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060424.seq
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18; c... 132 6e-30
UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118; ... 127 3e-28
UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659; ... 118 2e-25
UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78; E... 113 4e-24
UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24; c... 113 5e-24
UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13; c... 111 2e-23
UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18; P... 105 8e-22
UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 104 2e-21
UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6; Co... 103 3e-21
UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1; Ar... 97 3e-19
UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1; Pr... 96 9e-19
UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551; ... 93 6e-18
UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5; Al... 92 1e-17
UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4; Ne... 91 2e-17
UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;... 90 6e-17
UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2; Va... 90 6e-17
UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1; Ca... 90 6e-17
UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3; Al... 89 1e-16
UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1; Phae... 89 1e-16
UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14... 87 5e-16
UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7; Ch... 86 7e-16
UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6; Ar... 86 9e-16
UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1; Pe... 84 3e-15
UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3; Fu... 84 3e-15
UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10; F... 83 9e-15
UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5; Eu... 83 9e-15
UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3; Bo... 79 8e-14
UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 79 8e-14
UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xe... 79 1e-13
UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1; Ac... 79 1e-13
UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3; As... 79 1e-13
UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;... 75 2e-12
UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;... 75 2e-12
UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1; Xi... 75 2e-12
UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=13... 74 3e-12
UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1; Scen... 74 4e-12
UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 73 7e-12
UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11... 69 9e-11
UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6; Me... 69 1e-10
UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1; Va... 68 2e-10
UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1; Lo... 68 2e-10
UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Hi... 68 3e-10
UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11... 66 8e-10
UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 64 4e-09
UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18; A... 64 4e-09
UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1; Ha... 62 2e-08
UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3; Me... 59 1e-07
UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1; ... 58 2e-07
UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;... 58 3e-07
UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132; ... 57 4e-07
UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12; M... 56 8e-07
UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1; Rh... 56 8e-07
UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1; Di... 56 1e-06
UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9; Em... 55 1e-06
UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1; Li... 54 3e-06
UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1; Tr... 52 1e-05
UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2; Cr... 52 2e-05
UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1; St... 50 4e-05
UniRef50_Q7NIM1 Cluster: Cytochrome c oxidase subunit III; n=1; ... 50 7e-05
UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1; Mi... 50 7e-05
UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;... 49 1e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 49 1e-04
UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3; Em... 46 7e-04
UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n... 46 0.001
UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9; Euka... 45 0.002
UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit I... 45 0.002
UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia gloss... 43 0.008
UniRef50_Q06475 Cluster: Cytochrome c oxidase subunit 3 (EC 1.9.... 42 0.020
UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4; Ve... 41 0.026
UniRef50_P50677 Cluster: Cytochrome c oxidase subunit 3 (EC 1.9.... 40 0.079
UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;... 39 0.10
UniRef50_Q5DNB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Le... 39 0.10
UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2; ... 39 0.14
UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18; E... 39 0.14
UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15; P... 38 0.18
UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;... 38 0.24
UniRef50_Q6NGA0 Cluster: Cytochrome c oxidase subunit 3; n=46; A... 38 0.24
UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3; Di... 37 0.42
UniRef50_A7BSH5 Cluster: Cytochrome c oxidase aa3, subunit III; ... 37 0.55
UniRef50_A3HUQ8 Cluster: Probable cytochrome-c oxidase transmemb... 36 0.73
UniRef50_UPI0000DAE542 Cluster: hypothetical protein Rgryl_01000... 36 0.97
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 0.97
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 36 0.97
UniRef50_A2D6E2 Cluster: Cytochrome c oxidase subunit 3; n=2; Gy... 36 0.97
UniRef50_Q67ML0 Cluster: Cytochrome C oxidase subunit III; n=3; ... 34 3.9
UniRef50_Q9F3S7 Cluster: Cytochrome oxidase subunit III; n=3; Ba... 34 3.9
UniRef50_A0Z309 Cluster: Cytochrome c oxidase, subunit III; n=3;... 33 5.2
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 33 5.2
UniRef50_A6DSP2 Cluster: Cytochrome c oxidase subunit III; n=1; ... 33 6.8
UniRef50_Q9G8R7 Cluster: Cytochrome c oxidase subunit 3; n=1; Na... 33 6.8
UniRef50_Q1NH56 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q0LFY5 Cluster: Cytochrome c oxidase, subunit III; n=1;... 33 9.0
>UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Anopheles gambiae (African malaria mosquito)
Length = 262
Score = 132 bits (320), Expect = 6e-30
Identities = 66/117 (56%), Positives = 78/117 (66%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP IE+G PP I FNPFQIPLLNT IL+ SGVTVT AHH+L+E N SQ Q L
Sbjct: 107 LSPTIELGMTWPPVGIAAFNPFQIPLLNTAILLASGVTVTWAHHALMEGNHSQATQGLFF 166
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRH 629
TI+LG YFTILQAYEY++ + F F G+HV+IGT FL IC++RH
Sbjct: 167 TIVLGVYFTILQAYEYIEAPFTIADAVYGSTFYMATGFHGLHVLIGTTFLLICFLRH 223
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/66 (40%), Positives = 31/66 (46%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P TGAIG +T ++G YQ RDISREGT+QG HT V
Sbjct: 18 PLTGAIGAMTTVSGLVQWFHQYTMTLFILGNVITILTMYQWWRDISREGTFQGLHTFPVT 77
Query: 193 KGLR*G 210
GLR G
Sbjct: 78 IGLRWG 83
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 640 HFSKNHHFGFESCSLDIGHFV 702
HFSKNHHFGFE+ + HFV
Sbjct: 227 HFSKNHHFGFEAAAW-YWHFV 246
>UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118;
Bilateria|Rep: Cytochrome c oxidase subunit 3 - Locusta
migratoria (Migratory locust)
Length = 263
Score = 127 bits (306), Expect = 3e-28
Identities = 63/117 (53%), Positives = 75/117 (64%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P IE+G PP I PFNP QIPLLNT IL+ SGVT+T AHHS++E N SQ Q L
Sbjct: 108 LAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAHHSIMECNHSQALQGLFF 167
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRH 629
T++LGFYFT+LQ YEY + + F F G+HVIIGT FL C IRH
Sbjct: 168 TVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVATGFHGLHVIIGTTFLLTCLIRH 224
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P TGAIG + L +G Q RD+ REGT+QG HT LV+
Sbjct: 19 PLTGAIGAMILTSGMTKWFHTFNMNLLMIGMTVIVLTMIQWWRDVVREGTFQGLHTKLVS 78
Query: 193 KGLR*G 210
KGLR G
Sbjct: 79 KGLRWG 84
>UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Homo sapiens (Human)
Length = 261
Score = 118 bits (283), Expect = 2e-25
Identities = 58/116 (50%), Positives = 77/116 (66%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P ++G PP+ ITP NP ++PLLNT +L+ SGV++T AHHSL+ENN +Q Q L +
Sbjct: 106 LAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLI 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TILLG YFT+LQA EY + + F F G+HVIIG+ FL IC+IR
Sbjct: 166 TILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIR 221
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P TGA+ L + +G YQ RD++RE TYQG HT V
Sbjct: 17 PLTGALSALLMTSGLAMWFHFHSMTLLMLGLLTNTLTMYQWWRDVTRESTYQGHHTPPVQ 76
Query: 193 KGLR*G 210
KGLR G
Sbjct: 77 KGLRYG 82
>UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78;
Eumetazoa|Rep: Cytochrome c oxidase subunit 3 - Gallus
gallus (Chicken)
Length = 261
Score = 113 bits (272), Expect = 4e-24
Identities = 57/116 (49%), Positives = 71/116 (61%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P E+G PP+ + P NP ++PLLNT IL+ SGVTVT AHHS+ E N Q L L
Sbjct: 106 LAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTL 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TILLGFYFT LQA EY + + F F G+HVIIG+ FL +C +R
Sbjct: 166 TILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSFLTVCLLR 221
Score = 34.3 bits (75), Expect = 3.0
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 139 RDISREGTYQGKHTILVNKGLR*G 210
RD+ RE T+QG HT V KGLR G
Sbjct: 59 RDVVRESTFQGHHTPTVQKGLRYG 82
>UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Rhipicephalus sanguineus (Brown dog tick)
Length = 257
Score = 113 bits (271), Expect = 5e-24
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSPNIEIG PP I PFNPF+IPLLN+ ILI SG+TVT +HH+++ N+ L +
Sbjct: 104 LSPNIEIGSQWPPKGIYPFNPFEIPLLNSTILISSGITVTWSHHAIMNKNYISALNSLLI 163
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TILLG FT+ Q +EY + ++ F F G+HV+IG++FL + Y R
Sbjct: 164 TILLGVAFTMFQGFEYFQAQFKISDGIFGSTFFMTTGFHGLHVLIGSIFLLVSYFR 219
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P T +I L+L G ++Q RDISREG++QG HT V
Sbjct: 15 PITSSISALSLTLGFVSYFQNLSMYLILLAVLMITISSFQWWRDISREGSFQGFHTHWVL 74
Query: 193 KGLR*G 210
GL+ G
Sbjct: 75 NGLKMG 80
>UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Dugong dugon (Dugong)
Length = 261
Score = 111 bits (266), Expect = 2e-23
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P E+G PP+ I P +P ++PLLNT +L+ SGVT+T AHHSL+E N Q Q L +
Sbjct: 106 LAPTPELGGCWPPTGIHPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALFI 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TI LG YFT+LQA EY + + F F G+HVIIG+ FL +C++R
Sbjct: 166 TISLGIYFTLLQASEYHEASFSISDGIYGSTFFMATGFHGLHVIIGSTFLAVCFLR 221
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P TGA+ L + +G YQ RD+ REGT+QG HT V
Sbjct: 17 PLTGALSALLMTSGLVMWFHYHSTILVLLGLLTNILTMYQWWRDVVREGTFQGHHTPTVQ 76
Query: 193 KGLR*G 210
KGLR G
Sbjct: 77 KGLRYG 82
>UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18;
Protostomia|Rep: Cytochrome c oxidase subunit 3 - Apis
mellifera ligustica (Common honeybee)
Length = 259
Score = 105 bits (253), Expect = 8e-22
Identities = 56/116 (48%), Positives = 68/116 (58%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
+SPNIEI PP I FNP +IPLLN+ IL+ SG TVT +H+ LI NN +K L L
Sbjct: 105 ISPNIEINMTWPPKNIKFFNPMEIPLLNSFILVSSGFTVTLSHYYLIINNLKLSKSYLLL 164
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TILLG YFTILQ EY +F F G+HV+IG++FL I R
Sbjct: 165 TILLGIYFTILQTIEYSNSFFCFNDSIYGSIFFMATGFHGLHVLIGSIFLLISLYR 220
>UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 -
Leptotrombidium pallidum
Length = 259
Score = 104 bits (250), Expect = 2e-21
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = +3
Query: 282 SPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLT 461
SPN+EIG I PP ++ PF +IPLLNTIIL+ SG T+T AHH L++ + + LT
Sbjct: 105 SPNVEIGSIWPPQKVVPFPVEEIPLLNTIILLSSGGTLTAAHHFLLKGEKKHSSSLMKLT 164
Query: 462 ILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXIC 617
ILLG FT+LQ YEY++ + F F G HVI+G++FL C
Sbjct: 165 ILLGMLFTLLQGYEYLEAKFSMSDSSFGSAFFLATGFHGAHVIVGSIFLSAC 216
>UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6;
Coelomata|Rep: Cytochrome c oxidase subunit 3 -
Acrochordus granulatus (Rasp-skinned water snake)
Length = 261
Score = 103 bits (248), Expect = 3e-21
Identities = 51/116 (43%), Positives = 67/116 (57%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L P E+G PP+ ITP NP ++PLLNT +L+ SG T+T +HH++ N + L +
Sbjct: 106 LVPTPELGAEWPPTGITPLNPMEVPLLNTAVLLSSGATITWSHHTMTNGNKKEATYALMI 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TI+LG YFT LQ EY + LF F G+HV+IGT FL IC IR
Sbjct: 166 TIMLGIYFTTLQLSEYKDTPFTISDSVYGSLFFVATGFHGLHVMIGTTFLIICLIR 221
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
P TGA+G L L +G Q RD+ RE T+QG HT V
Sbjct: 17 PLTGAMGSLLLASGLALWFHTGTLMILKLGLLTLTLTMVQWWRDVIRESTFQGHHTKGVQ 76
Query: 193 KGLR*G 210
K +R G
Sbjct: 77 KNMRYG 82
>UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1;
Armillifer armillatus|Rep: Cytochrome c oxidase subunit
3 - Armillifer armillatus
Length = 260
Score = 97.5 bits (232), Expect = 3e-19
Identities = 53/116 (45%), Positives = 67/116 (57%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSPN +G PP I F+P +IPLLNT+IL+ SG +VT +HHSL+ N+SQ L L
Sbjct: 105 LSPNTFLGLHWPPLGIKSFSPTEIPLLNTLILLSSGASVTWSHHSLLNKNYSQFLLSLSL 164
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TI+LG YFT LQ EY L +F F G HVI+G+L L + R
Sbjct: 165 TIILGTYFTSLQLLEYNLAPFTLSESIFSSMFFLATGFHGFHVILGSLLLTLSLTR 220
>UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Primeuchroeus sp. M48|Rep: Cytochrome c oxidase subunit
3 - Primeuchroeus sp. M48
Length = 227
Score = 95.9 bits (228), Expect = 9e-19
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP +EIG I PP ITPFNPF +PLLNTIIL+ SG+T+T HHS++ N ++ + +
Sbjct: 105 LSPAVEIGGIWPPKGITPFNPFHVPLLNTIILLSSGLTITWCHHSIMNNMKNEAINSMKM 164
Query: 459 TILLGFYFTILQAYEYMK 512
TI LG F+ILQ YEY++
Sbjct: 165 TITLGILFSILQGYEYIE 182
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +2
Query: 473 ILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHGXSCNNWN 598
ILF EA FTIAD IYGSTFF+ TGFHG + WN
Sbjct: 170 ILFSILQGYEYIEAPFTIADSIYGSTFFLTTGFHGLPRSYWN 211
>UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 265
Score = 93.1 bits (221), Expect = 6e-18
Identities = 49/118 (41%), Positives = 64/118 (54%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P +EIG I PP I +P++IP LNT+IL+ SG VT AHH+++ + L
Sbjct: 109 LAPAVEIGGIWPPKGIEVLDPWEIPFLNTLILLSSGAAVTWAHHAILAGKEKRAVYALVA 168
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHF 632
T+LL FT Q EY + + F F G HVIIGTLFL IC IR +
Sbjct: 169 TVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQY 226
>UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5;
Aleyrodidae|Rep: Cytochrome c oxidase subunit 3 -
Aleurochiton aceris
Length = 261
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/116 (40%), Positives = 66/116 (56%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP+I +G PP P + IPLLNT+IL+ SG +T AH+SL+ NN+ K +
Sbjct: 106 LSPDISLGSNWPPLGTQPVSYLNIPLLNTLILLSSGFFITWAHYSLMNNNYYMMKFNYTV 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+IL+G YF I+Q YEY ++ F F G HVI+G LF+ I ++R
Sbjct: 166 SILMGVYFFIIQMYEYFEISFDFSDSSFSSSFFILTGFHGFHVIVGILFITINFLR 221
>UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4;
Neoptera|Rep: Cytochrome c oxidase subunit 3 -
Schizaphis graminum (Aphid)
Length = 261
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/116 (43%), Positives = 66/116 (56%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P+IE+G PP I FNP IPLLNTIIL+ S T+T AH L+ N+ +T + L
Sbjct: 106 LAPSIELGLNWPPKNIMFFNPLLIPLLNTIILLTSSFTITLAHLYLLNNSKKKTIIFMNL 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TI+L YF +LQ EY + F F G+HVIIGT+FL + +R
Sbjct: 166 TIILSIYFLMLQMLEYKQATFTFSDSIFGSSFYMATGFHGLHVIIGTIFLIVNLMR 221
>UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Cytochrome c
oxidase, subunit III - Neorickettsia sennetsu (strain
Miyayama)
Length = 274
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PP I NP+ +PLLNT++L+ SG ++T AHHS+++ + + L T++LG FT L
Sbjct: 124 PPEGIVAVNPWNLPLLNTMVLLLSGASMTWAHHSVLKGDNDGVVKGLLYTVVLGLIFTCL 183
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*Q----QDFMGIHVIIGTLFLXICYIR 626
Q YEY L E ++S F G+HVIIGT+FL +CY R
Sbjct: 184 QGYEYYHSAFALAEEGYKAIYSSNFYIATGFHGLHVIIGTIFLAVCYFR 232
>UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2;
Varroa destructor|Rep: Cytochrome c oxidase subunit 3 -
Varroa destructor (honeybee mite)
Length = 263
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/104 (43%), Positives = 64/104 (61%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP+IEIG + PP I FNP++IPLLNT++L+ SG T+T +H+S++ N L L
Sbjct: 104 LSPSIEIGMMWPPKGIIFFNPYEIPLLNTMVLLMSGFTITWSHYSILNNKKLMALVSLLL 163
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVI 590
T+ LG YF++LQ EY + L + +F F G+HVI
Sbjct: 164 TVSLGIYFSLLQYMEYKQALFTINDGICGSVFYMLTGFHGLHVI 207
Score = 39.5 bits (88), Expect = 0.079
Identities = 27/101 (26%), Positives = 45/101 (44%)
Frame = +2
Query: 302 KNMTSFKNYTI*SIPNSLIKYNHFN*IWGNSNMSSSLIDRK*LLTNKTKIXFNYFIRILF 481
K + F Y I + ++ + F W + S+++ K L+ + + I F
Sbjct: 117 KGIIFFNPYEIPLLNTMVLLMSGFTITWSHY----SILNNKKLMA-LVSLLLTVSLGIYF 171
Query: 482 YYFTSI*IYEASFTIADRIYGSTFFIATGFHGXSCNNWNFI 604
+ +A FTI D I GS F++ TGFHG WN++
Sbjct: 172 SLLQYMEYKQALFTINDGICGSVFYMLTGFHGLHVIYWNYL 212
>UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1;
Candida stellata|Rep: Cytochrome c oxidase subunit 3 -
Candida stellata (Yeast)
Length = 271
Score = 89.8 bits (213), Expect = 6e-17
Identities = 50/116 (43%), Positives = 64/116 (55%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P++EIG I PP I P +PL NT+IL+ SG T+T +HH+LI N + L L
Sbjct: 116 LTPSVEIGEIWPPISIIPIQATDLPLFNTLILLISGATITYSHHALIARNRFNSIFGLFL 175
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TILLGF F I Q +EY L +F GIHVI GTL L + + R
Sbjct: 176 TILLGFLFIICQYFEYYYCSYTLADSVYGSVFFMLTGLHGIHVITGTLLLCLNFYR 231
>UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3;
Aleyrodinae|Rep: Cytochrome c oxidase subunit 3 -
Bemisia tabaci (Sweetpotato whitefly)
Length = 262
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/140 (37%), Positives = 72/140 (51%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP++ G I PP I + IPLLNT+IL+ SG +T AH+ L NNF +K L +
Sbjct: 107 LSPDMTTGSIWPPYLIIQMSFMDIPLLNTLILLMSGFLITWAHYDLTMNNFKNSKTSLLM 166
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX* 638
+ILLG YF ++Q YEY+ F F G+HV+IG +FL I +
Sbjct: 167 SILLGTYFLMIQGYEYLNSNFSFNDSVFGNSFFILTGFHGLHVMIGLIFL-ITMLNQLSM 225
Query: 639 SLF*KSSLWV*KLQPXYWAF 698
F +L+ + YW F
Sbjct: 226 KTFSLVNLYGFEYSIWYWHF 245
>UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1;
Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase
subunit 3 - Phaeosphaeria nodorum SN15
Length = 275
Score = 88.6 bits (210), Expect = 1e-16
Identities = 47/112 (41%), Positives = 63/112 (56%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP +E+G + PP I +PF++PL+NT+IL+ SG TVT HH LI N S+T L
Sbjct: 120 LSPAVELGAMWPPMGIEAIDPFELPLINTVILLSSGFTVTYGHHFLINGNRSKTLYGLLY 179
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXI 614
T++L FT LQ EY + F F G+HV+IGT FL +
Sbjct: 180 TVILATIFTGLQGVEYSVSSFTISDGAFGSCFYFGTGFHGLHVMIGTAFLAV 231
>UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14;
Alphaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Silicibacter pomeroyi
Length = 271
Score = 86.6 bits (205), Expect = 5e-16
Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Frame = +3
Query: 336 NPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLXLTILLGFYFTILQAYEYMK 512
+PF +PL+NT++L+ SG VT AHH+L+ NN + Q L + I LG FT+LQAYEY +
Sbjct: 126 DPFHLPLINTLVLLLSGCAVTWAHHALVHNNDRKALIQGLSIGIFLGMIFTLLQAYEYAE 185
Query: 513 LLLQLLIEF-MDPLFS---*QQDFMGIHVIIGTLFLXICYIR 626
LLL F D +S F G+HVIIGT+FL +C +R
Sbjct: 186 LLLHEDWTFGGDQFYSNFFMATGFHGMHVIIGTIFLAVCLLR 227
>UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7;
Chromadorea|Rep: Cytochrome c oxidase subunit 3 -
Caenorhabditis elegans
Length = 255
Score = 86.2 bits (204), Expect = 7e-16
Identities = 50/116 (43%), Positives = 63/116 (54%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L P E+G P + NPF +PLLNTIIL+ SGVTVT AHHSL+ N + L
Sbjct: 102 LVPVHELGETWSPFGMHLVNPFGVPLLNTIILLSSGVTVTWAHHSLLSN--KSCTNSMIL 159
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
T LL YFT +Q EYM+ + +F F GIHV+ G LFL ++R
Sbjct: 160 TCLLAAYFTGIQLMEYMEASFSIADGVFGSIFYLSTGFHGIHVLCGGLFLAFNFLR 215
>UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 - Ixodes
hexagonus (Hedgehog tick)
Length = 261
Score = 85.8 bits (203), Expect = 9e-16
Identities = 45/105 (42%), Positives = 59/105 (56%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
P + P F+IPLL T ILI SG++++ +H S+I NNF + L +TI+LG FT L
Sbjct: 117 PLKMLLPLILFEIPLLKTTILISSGISISWSHQSIINNNFKEAFNSLLITIMLGVTFTFL 176
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
Q +EY + + F F GIHVIIGT FL I IR
Sbjct: 177 QGWEYKQSQFSMSDSIFGSTFFMTTGFHGIHVIIGTSFLIISLIR 221
>UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Pediculus humanus corporis|Rep: Cytochrome c oxidase
subunit 3 - Pediculus humanus corporis (human body
louse)
Length = 273
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/116 (35%), Positives = 65/116 (56%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP++ +G + PP ++P +PLLN+I+L+ SGV++T AH+ L+ N S + L +
Sbjct: 118 LSPDVSLGLLYPPVGVSPVGVLGVPLLNSILLLSSGVSITWAHNELLSKNISSSLIGLLI 177
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
T++LG F + QA EY + +F F G HV +G +F+ I IR
Sbjct: 178 TLILGLVFLMFQAVEYKTSSFTMADSSFGSVFFLMTGFHGAHVCVGVVFITISTIR 233
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 139 RDISREGTYQGKHTILVNKGLR*G 210
RD++RE T+QGKHT+ V GLR G
Sbjct: 71 RDVTREATFQGKHTMEVIAGLRLG 94
>UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Smittium culisetae (Gut fungus)
Length = 260
Score = 84.2 bits (199), Expect = 3e-15
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN-NFSQTKQRLX 455
L P IE+G + PP I NPF IPLLNT++L+ SG TVT AH+S+I+N N +T L
Sbjct: 104 LVPEIELGGLWPPLGIEAVNPFGIPLLNTLLLLSSGATVTWAHYSMIKNTNKKETIISLF 163
Query: 456 LTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
LTIL FT+LQ +EY + F +HV++G FL + R
Sbjct: 164 LTILYATIFTLLQLFEYYYAPFSFVDGVYGCTFYAGTGLHALHVLVGNTFLIVALYR 220
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 604 FYXFAIFDILXNHFSKNHHFGFESCSLDIGHFV 702
F A++ I+ NHF++ HH GFE ++ HFV
Sbjct: 213 FLIVALYRIIKNHFTQTHHLGFE-LAIIYWHFV 244
>UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Monoblepharella sp. JEL15
Length = 292
Score = 82.6 bits (195), Expect = 9e-15
Identities = 45/116 (38%), Positives = 62/116 (53%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP+I +G + PP I +P+ IPLL +IIL+ SG T T AH++LI N +
Sbjct: 106 LSPDIVLGGVWPPIGIVSVDPWSIPLLGSIILLSSGATCTVAHNALINGNKDLAVATMFA 165
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
T++LGF F LQA EY + +F G HVIIG +FL + +R
Sbjct: 166 TVVLGFLFVGLQATEYYVSEFSIADSIFGTVFYMTTGLHGTHVIIGAIFLTVMLVR 221
>UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5;
Eukaryota|Rep: Cytochrome c oxidase subunit 3 -
Acanthamoeba castellanii (Amoeba)
Length = 329
Score = 82.6 bits (195), Expect = 9e-15
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN-----FSQTK 443
LSP++ +G + PP I NP +IPLLNT+IL+ SG+TVT +HH + + + FS +
Sbjct: 146 LSPSVVLGSVWPPLGINVLNPLKIPLLNTLILLLSGLTVTWSHHVIRDKSWQKFFFSNSN 205
Query: 444 QR----------------LXLTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFM 575
L LT+ LG FT+ Q YEY K + F
Sbjct: 206 NEEFKAPLLDNYVICAFALFLTVFLGLEFTVWQGYEYYKASFYIYDGVYGSTFYMTTGLH 265
Query: 576 GIHVIIGTLFLXICYIR 626
G+HVIIGTLFL +C+ R
Sbjct: 266 GLHVIIGTLFLIVCFFR 282
Score = 39.5 bits (88), Expect = 0.079
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 464 FIRILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHG 577
F+ + F + Y+ASF I D +YGSTF++ TG HG
Sbjct: 229 FLGLEFTVWQGYEYYKASFYIYDGVYGSTFYMTTGLHG 266
>UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Boopidae|Rep: Cytochrome c oxidase subunit 3 -
Heterodoxus macropus (wallaby louse)
Length = 263
Score = 79.4 bits (187), Expect = 8e-14
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +3
Query: 324 ITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI--ENNFSQTKQRLXLTILLGFYFTILQA 497
I NP +PLL T+IL+ SGV+VT H+ L+ E N S K L +T++LG F LQ
Sbjct: 121 IMSLNPSTVPLLGTMILLSSGVSVTWCHNELMLSEGNLSSMKNSLLITVILGMVFAALQM 180
Query: 498 YEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+EY + LF F G HVI+GT+FL I ++R
Sbjct: 181 WEYFMSTFTMSDGVYGSLFYMMTGFHGFHVIVGTIFLFIIFLR 223
>UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 269
Score = 79.4 bits (187), Expect = 8e-14
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITP--FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRL 452
LSP E+G + PP I +P ++PLLNT+IL+ SG ++T AH+SLI N + L
Sbjct: 112 LSPTFELGAVWPPVGIADKTIDPLEVPLLNTVILLTSGASLTYAHYSLIARNRENALKGL 171
Query: 453 XLTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFL 608
+TI L F F QAYEY + F GIH+I+GT+ L
Sbjct: 172 YMTIALSFLFLGGQAYEYWNAPFTISDSVYGASFYFATGLHGIHIIVGTILL 223
>UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xenos
vesparum|Rep: Cytochrome c oxidase subunit 3 - Xenos
vesparum
Length = 251
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/99 (38%), Positives = 53/99 (53%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PP + NP+ IPLLNT+IL S +T+T +HH LI N+ K +T++LG F L
Sbjct: 112 PPKFLLMINPYHIPLLNTLILFSSSITITWSHHCLINKNYKIMKISSFITLMLGITFITL 171
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFL 608
Q YE+ + + F F G HVIIG +F+
Sbjct: 172 QIYEFFTMKFNMNDSIYGSSFYLTTGFHGFHVIIGLMFI 210
>UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Acanthocardia tuberculata|Rep: Cytochrome c oxidase
subunit 3 - Acanthocardia tuberculata (tuberculate
cockle)
Length = 278
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQR------LXLTILLG 473
PP I +P++IP +NT IL+ SG+TVT AH + N + TK L +T++LG
Sbjct: 124 PPLGIKCLSPWKIPAVNTAILVGSGLTVTYAHRAAKSNKYKWTKTNPELTLGLFVTVVLG 183
Query: 474 FYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
F F LQ YEY L + F F G+HV++GTL+L +C +R
Sbjct: 184 FVFLGLQMYEYWWLTYSMNDGIFGSCFYIMTGFHGLHVVVGTLWLAVCLLR 234
>UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 268
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/112 (37%), Positives = 60/112 (53%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
++P IE+G + PP I P ++PLLNTI+L+ SG T+T +HH+L+ N T L L
Sbjct: 113 MAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRFNTLLGLIL 172
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXI 614
TI L F I Q EY + +F F G+H+IIG + L +
Sbjct: 173 TIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTGFHGLHIIIGIIMLGV 224
>UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;
Azoarcus|Rep: Cytochrome c oxidase, subunit III -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 283
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +3
Query: 327 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
TP + IP LNT+IL+ SGVT+T AH+ L+++N SQ K L LTILLG F Q YEY
Sbjct: 142 TPMGAWGIPALNTLILLSSGVTLTWAHYGLLKDNRSQLKIGLLLTILLGVTFLGFQIYEY 201
Query: 507 M----KLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXI 614
+ +L LQL F F G+HV IG + L +
Sbjct: 202 VHAYRELNLQLDTGIYGSTFFMLTGFHGLHVTIGAIMLTV 241
>UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
oxidase, subunit III - Parvularcula bermudensis HTCC2503
Length = 319
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
P + P +P+ +P +NT+IL+ SG TVT AHH++ + K L +T+ LG F+
Sbjct: 165 PGPGVEPLSPWGLPFVNTVILLLSGTTVTWAHHAIQVGDKEGFKWGLIVTVALGVIFSFF 224
Query: 492 QAYEYMKLLLQLLIEF-----MDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
Q EY ++L Q + F F F G HV+IGT+FL IC R
Sbjct: 225 QGVEYYEVLSQDMFSFNGGSIYGSSFFMATGFHGAHVVIGTIFLAICLAR 274
>UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1;
Xiphinema americanum|Rep: Cytochrome c oxidase subunit 3
- Xiphinema americanum
Length = 249
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/96 (40%), Positives = 53/96 (55%)
Frame = +3
Query: 339 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLL 518
PFQ+PLLNTI+L+ SGVT T +HH ++ S L ++LLG YF +LQ EY L
Sbjct: 116 PFQVPLLNTIVLLMSGVTATLSHHEVLAGEKSMW---LFYSLLLGIYFLMLQGMEYYSSL 172
Query: 519 LQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ LF F G HV +G + L I ++R
Sbjct: 173 FSISSSVFGSLFFLGTGFHGFHVCLGAVMLFISFLR 208
>UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=130;
Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
Pseudomonas aeruginosa
Length = 295
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PPS + P+++PL+NTI+L+ S TVT AHH+L +N K L LT+LLG F IL
Sbjct: 151 PPSAV--IEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLIL 208
Query: 492 QAYEYM----KLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
QA EY+ +L L L F F G HV +G L L I IR
Sbjct: 209 QAEEYVHAYNELGLTLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIR 257
>UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1;
Scenedesmus obliquus|Rep: Cytochrome oxidase subunit 3 -
Scenedesmus obliquus
Length = 311
Score = 73.7 bits (173), Expect = 4e-12
Identities = 43/115 (37%), Positives = 55/115 (47%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L P I++G PP I P + +P NTI+L+RS T A H++ NN S K L
Sbjct: 124 LMPTIQVGMSWPPVGIVPVHWTALPRTNTILLLRSYFTANAAKHAMDHNNKSLCKLHLRT 183
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYI 623
TI LG F Q EY F F G+HVI+G L+L +CYI
Sbjct: 184 TIGLGLLFVYCQYLEYTGAAFTFSDTVFGSAFYLTTGFHGLHVILGFLYLTVCYI 238
>UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Gliricola porcelli|Rep: Cytochrome c oxidase subunit 3 -
Gliricola porcelli
Length = 234
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/108 (38%), Positives = 59/108 (54%)
Frame = +3
Query: 285 PNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTI 464
P+I IG + P I+P +PLL T+IL+ SGVTVT H ++EN + + L +TI
Sbjct: 110 PSIFIGALWPSWGISPIENMNVPLLGTLILLSSGVTVTICHKQMLENVYE--PKFLFITI 167
Query: 465 LLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFL 608
+LG F+ILQ EY++ F F G HVI+GT+ L
Sbjct: 168 ILGVMFSILQMMEYIENSFCFNDSVYGSFFFLATGFHGFHVILGTIML 215
>UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11;
Rickettsiales|Rep: Cytochrome c oxidase, subunit III -
Anaplasma phagocytophilum (strain HZ)
Length = 285
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +3
Query: 294 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLG 473
++ + PP I + + +P +NT+ L+ SG T+T +HH L+ ++ + + L TI LG
Sbjct: 131 KVATVWPPVGIETVSAWSLPFMNTVTLLLSGCTITWSHHYLMIDDIKSSLKMLAFTIGLG 190
Query: 474 FYFTILQAYEYMKLLLQLLIEFMDPLFS*Q----QDFMGIHVIIGTLFLXICYIRHF 632
F+ Q EY+ E + ++S F G+HV++G +FL +C+IR F
Sbjct: 191 LVFSTFQLIEYLHAGFAFSEEGLKAVYSSNFYMATGFHGLHVLMGIVFLIVCWIRMF 247
>UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6;
Mermithidae|Rep: Cytochrome c oxidase subunit 3 -
Hexamermis agrotis
Length = 257
Score = 68.5 bits (160), Expect = 1e-10
Identities = 46/135 (34%), Positives = 67/135 (49%)
Frame = +3
Query: 294 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLG 473
E+G P IT N +PLLN+++L+ SGV++T H+L+ + L LTILLG
Sbjct: 109 ELGFQWPSKGITAVNYLSVPLLNSLLLLSSGVSLT-ISHNLMSLDLKSFNLYLGLTILLG 167
Query: 474 FYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*K 653
F+ Q +EY+ L +F F G+HVIIG+ L + IR L
Sbjct: 168 LLFSYCQYWEYLMLDFLWSDSSYGSIFFMGTGFHGLHVIIGSTILSVILIRDMMNHLLMD 227
Query: 654 SSLWV*KLQPXYWAF 698
S ++ +L YW F
Sbjct: 228 SMIF--ELGAWYWHF 240
>UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Vargula hilgendorfii|Rep: Cytochrome c oxidase subunit 3
- Vargula hilgendorfii (Sea firefly) (Cypridina
hilgendorfii)
Length = 259
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/117 (34%), Positives = 56/117 (47%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L P EIG PP I +P PLL T++L+ SG +T +HH++ + Q L
Sbjct: 104 LVPTPEIGLTWPPQGIHIPSPSGAPLLGTLLLLSSGAFLTWSHHAMTTGQDTDVTQGLIW 163
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRH 629
++LG F +LQA EY + + F G HV+IG L IC +RH
Sbjct: 164 CLILGEGFAVLQASEYACAQFSIADSALGSCFFMLTGLHGSHVLIGLSLLEICLVRH 220
>UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lottia digitalis|Rep: Cytochrome c oxidase subunit 3 -
Lottia digitalis (California fingered limpet)
Length = 280
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/116 (32%), Positives = 57/116 (49%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSP+ E+G PP I P N + +P LN+ +LI SG T+T A ++ E + + +
Sbjct: 108 LSPSFEVGMTWPPQGIVPPNAWGLPFLNSTLLINSGFTLTWASRAVKEGSKWSAAAGMVM 167
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
TI LG F +Q E+ + F G+HV+ G +FL +C IR
Sbjct: 168 TIALGVIFMAVQMKEWWDAPFDIRDSVYGSCFYMMTGLHGLHVLGGLIFLFVCLIR 223
>UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hiatella arctica|Rep: Cytochrome c oxidase subunit 3 -
Hiatella arctica
Length = 275
Score = 67.7 bits (158), Expect = 3e-10
Identities = 43/111 (38%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PP I + IPLLNT++L+ SGVTVT + N T L +I LG F+ L
Sbjct: 125 PPEGIFVVDYAGIPLLNTVLLVSSGVTVTVGLKAAKHYNRISTLWGLKYSIFLGVIFSCL 184
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXI----CYIRHF 632
Q EY + ++ LF F G+HV IGT+FL I CY HF
Sbjct: 185 QLEEYKECYFTMMDGVYGSLFFMMTGFHGLHVCIGTIFLTIMLFRCYFGHF 235
>UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11;
Betaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 293
Score = 66.1 bits (154), Expect = 8e-10
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +3
Query: 327 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYE- 503
T PF +P +NT +L+ SGVT+T AHH+L +N+ T + T+LLG F +Q YE
Sbjct: 152 TTMTPFWLPTINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEY 211
Query: 504 ---YMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
Y +L L+L F F G HV +G L L +R
Sbjct: 212 AHAYSELNLKLTSGVYGSTFYMLTGFHGFHVFVGMLMLLFITLR 255
>UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Globodera pallida|Rep: Cytochrome c oxidase subunit 3 -
Globodera pallida
Length = 257
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/118 (29%), Positives = 59/118 (50%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L ++++G P + NPF +PLLN+++L+ S + +T +H+ + N FS L
Sbjct: 104 LVTSLDLGFWGVPLGVXKINPFGLPLLNSLLLLSSALILTNSHYFFLANGFSSL--TLLF 161
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHF 632
++ LG F +Q +EY L +F F G HV+ G FL + +R+F
Sbjct: 162 SVFLGGVFLGVQGFEYQNSSFSLSDSSYGSIFFLATGFHGFHVLFGLCFLIVSGVRNF 219
>UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 269
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/116 (31%), Positives = 56/116 (48%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
+SP++ +G PP I P ++PLLNTIIL+ SG TVT +HH+LI N ++ L +
Sbjct: 114 MSPDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLI 173
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
T L F Q EY + +F +H+++ L + Y R
Sbjct: 174 TFWLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGLHFLHMVMLAAMLGVNYWR 229
>UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hanseniaspora uvarum|Rep: Cytochrome c oxidase subunit 3
- Hanseniaspora uvarum (Yeast)
Length = 262
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/118 (29%), Positives = 54/118 (45%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
++P IE+G P I ++PLLNTI+L+ SG TVT +HH I ++ + + +
Sbjct: 108 MNPTIELGLQWAPLDIVKVEAMELPLLNTILLLSSGATVTLSHHKWINGDYKNSTIAMFI 167
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHF 632
T LL F + Q EY+ + F G H+I L L +R +
Sbjct: 168 TTLLVVVFVVFQVVEYITAQFTITDGVFGSTFYAGTGLHGFHMITLILMLSTVTVRMY 225
>UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Metazoa|Rep: Cytochrome c oxidase subunit 3 - Trichoplax
adhaerens
Length = 305
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI 419
L+P++E+G + PP I +PF +PLLNT IL+ SG TVT AHH++I
Sbjct: 106 LAPSVELGSVWPPLGIEALDPFAVPLLNTTILLSSGATVTWAHHAII 152
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%)
Frame = +3
Query: 450 LXLTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
L +T+LLG FT LQA+EY + + F G+HV++GT FL +C+IR
Sbjct: 207 LLMTVLLGIIFTGLQAFEYKEASFAISDSVYGSTFFMLTGTHGLHVLVGTTFLIVCFIR 265
Score = 39.9 bits (89), Expect = 0.060
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 509 EASFTIADRIYGSTFFIATGFHG 577
EASF I+D +YGSTFF+ TG HG
Sbjct: 227 EASFAISDSVYGSTFFMLTGTHG 249
Score = 34.3 bits (75), Expect = 3.0
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +1
Query: 13 PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTILVN 192
PF GA G +G A RD+ REGT+QG HT +V
Sbjct: 17 PFVGASGAFLFTSGAVILFHYNDYRLALTGLFLIIITASAWWRDVIREGTHQGHHTQVVV 76
Query: 193 KGLR*G 210
+GL+ G
Sbjct: 77 RGLKLG 82
>UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1;
gamma proteobacterium HTCC2207|Rep: Cytochrome c oxidase
subunit III - gamma proteobacterium HTCC2207
Length = 313
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYM----KL 515
+PL NT+IL+ S VTV AH L NN Q L T+LLG F +LQA EY+ +
Sbjct: 178 LPLWNTVILVTSSVTVHIAHTGLKNNNRKQFVGWLGFTVLLGLIFLVLQAEEYIHAYQHM 237
Query: 516 LLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
L L F F G HV +GT L I + R
Sbjct: 238 GLTLDSGIYGTTFFMLTGFHGAHVTLGTAMLAIAWFR 274
>UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;
Gammaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Saccharophagus degradans (strain 2-40 / ATCC 43961
/ DSM 17024)
Length = 304
Score = 57.6 bits (133), Expect = 3e-07
Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 294 EIGRI*PPSRITPFNPFQ-----IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
E+G++ P F F +PL NTIIL+ S VTV AH L ++N Q L +
Sbjct: 147 ELGKVSGPGENMAFPGFGAMFGWLPLWNTIILLSSSVTVHFAHTGLKKDNKKQFNWWLGI 206
Query: 459 TILLGFYFTILQAYEY---MKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRH 629
T+LLG F LQ EY + L L F F G+HV +GT L + ++R
Sbjct: 207 TVLLGIIFLCLQVAEYSHAYHVNLTLDAGVYGNTFFMLTGFHGLHVTMGTFMLLVQWLRS 266
Query: 630 FX*SLF*KSSLWV*KLQPXYWAF 698
F + + + YW F
Sbjct: 267 VTKGHFSHNDCFGFEASSWYWHF 289
>UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132;
Mytilus|Rep: Cytochrome c oxidase subunit 3 - Mytilus
edulis (Blue mussel)
Length = 265
Score = 57.2 bits (132), Expect = 4e-07
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLX 455
LSP+ E+G PP I NP L T +LI SG+ VT AH S+ ++ L
Sbjct: 107 LSPSCELGMRWPPPGIRTPNPSSTSLFETGLLISSGLFVTQAHKSMRLKDYDVGPFIGLV 166
Query: 456 LTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+TI+ G F ++Q EY + +F F G+HV++GT++L + +R
Sbjct: 167 VTIVCGTVFFLVQLREYYWNSYTIADSVYGSVFYLLTGFHGMHVVVGTIWLMVSLVR 223
Score = 39.5 bits (88), Expect = 0.079
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 506 YEASFTIADRIYGSTFFIATGFHG 577
Y S+TIAD +YGS F++ TGFHG
Sbjct: 184 YWNSYTIADSVYGSVFYLLTGFHG 207
>UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12;
Macoma|Rep: Cytochrome c oxidase subunit 3 - Macoma
balthica
Length = 198
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/107 (33%), Positives = 48/107 (44%)
Frame = +3
Query: 288 NIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTIL 467
N+ G + PP I P P+ PL NT IL+ SG VT AH ++ ++ + L L +L
Sbjct: 86 NLSSGCLWPPRPIIPVYPWGAPLFNTAILLTSGAAVTWAHRAVAIHDREEAMIPLGLCVL 145
Query: 468 LGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFL 608
G F Q EY + F G HV+ GTLFL
Sbjct: 146 AGVVFLRFQFGEYSTASFTIADSAYGSCFYMLTGLHGSHVLGGTLFL 192
>UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Rhizophydium sp. 136|Rep: Cytochrome c oxidase subunit 3
- Rhizophydium sp. 136
Length = 275
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/118 (30%), Positives = 52/118 (44%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P IEI PP + N +PLLN+++L+ G T AHHS N + T L +
Sbjct: 121 LNPTIEIVTW-PPLGVNSINYLSLPLLNSVLLLSGGWIATWAHHSFFLGNKTNTLIGLII 179
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHF 632
++L F +Q EY + F GIHV+ +FL + R F
Sbjct: 180 AVILTIIFVYVQYLEYSYSEFTIADSVYGSSFFILTGTHGIHVMAAVIFLCVATYRIF 237
>UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit 3 -
Dicyema misakiense
Length = 255
Score = 55.6 bits (128), Expect = 1e-06
Identities = 39/116 (33%), Positives = 54/116 (46%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L P++ G P ++ F+PF +PLL T +LI S V VT +H S ++ T L
Sbjct: 107 LIPSVWTGFEWPLVGMSFFDPFSLPLLGTSLLISSAVFVTWSHGS---SSLKGTMISLLF 163
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ILLG F +Q EY+ + F G+HVIIG FL R
Sbjct: 164 SILLGSSFVCIQFIEYLSSSFTISSSSFGSCFFVATGLHGLHVIIGLFFLAFSLFR 219
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 449 IXFNYFIRILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHG 577
+ F+ + F I +SFTI+ +GS FF+ATG HG
Sbjct: 161 LLFSILLGSSFVCIQFIEYLSSSFTISSSSFGSCFFVATGLHG 203
>UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Tulipa
sp. CQ-2001
Length = 239
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/85 (36%), Positives = 44/85 (51%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
L+P +EIG I PP I +P++IP LNT IL SG VT AHH+++ + L
Sbjct: 110 LAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVA 169
Query: 459 TILLGFYFTILQAYEYMKLLLQLLI 533
T+ L T + + L L+I
Sbjct: 170 TLSLALVSTGFHGFHVLIGTLFLII 194
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 570 FMGIHVIIGTLFLXICYIRHF 632
F G HV+IGTLFL IC +R +
Sbjct: 180 FHGFHVLIGTLFLIICGLRQY 200
>UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lingula anatina|Rep: Cytochrome c oxidase subunit 3 -
Lingula unguis
Length = 275
Score = 54.0 bits (124), Expect = 3e-06
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Frame = +3
Query: 279 LSPNIEIGRI*PPS-RITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLX 455
L P+ E+G + PP I P +P+ +PLL IL+ SG + A + ++ F+ + +
Sbjct: 121 LVPSDELGCMWPPIVGIMPMDPYALPLLGVTILVSSGYSANWAVKT-VKAGFNDWRS-MG 178
Query: 456 LTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX 635
+T+ LG F+ LQ +EY + F F G+HV+ GT+F C ++
Sbjct: 179 VTVGLGILFSCLQLHEYKSAGFTMQDGIYGSCFYLITGFHGLHVLAGTMFNIYC-LKMMV 237
Query: 636 *SLF*KSSLWV*KLQPXYWAF 698
+ S + ++ YW F
Sbjct: 238 YGSYSPSHMTSIQMSVWYWHF 258
Score = 36.3 bits (80), Expect = 0.73
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 512 ASFTIADRIYGSTFFIATGFHG 577
A FT+ D IYGS F++ TGFHG
Sbjct: 198 AGFTMQDGIYGSCFYLITGFHG 219
>UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1;
Trichinella spiralis|Rep: Cytochrome c oxidase subunit 3
- Trichinella spiralis (Trichina worm)
Length = 257
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/104 (29%), Positives = 49/104 (47%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PP+ + +P +P LNTI+LI S TVT +H N + L LT++L F +
Sbjct: 114 PPTSLNMPSPLGVPSLNTILLITSSATVTMSHFQTSLPN-GKPLNWLLLTLMLSIMFITM 172
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYI 623
Q EY + +F G+HV++G++ L C +
Sbjct: 173 QYVEYHTSTFTMSSGVNGSIFFMTTGLHGLHVLLGSMALTTCLL 216
>UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2;
Crassostrea|Rep: Cytochrome c oxidase subunit 3 -
Crassostrea virginica (Eastern oyster)
Length = 290
Score = 51.6 bits (118), Expect = 2e-05
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS-QTKQRLX 455
LSP+IEIG PP+ + + PL NT +L+ S +++ AHH ++ +
Sbjct: 134 LSPSIEIGGCWPPAGLHCLDWSGTPLHNTALLVMSSGSISSAHHFFMDGEWEFGLGVSYY 193
Query: 456 LTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
LT+ L + F Q EYM L + F G+HVI GT L C R
Sbjct: 194 LTLYLSYLFIENQYMEYMWLPFTIADGVYGSCFFMLTGLHGLHVIAGTCGLLFCGAR 250
>UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1;
Strelkovimermis spiculatus|Rep: Cytochrome c oxidase
subunit 3 - Strelkovimermis spiculatus
Length = 257
Score = 50.4 bits (115), Expect = 4e-05
Identities = 37/135 (27%), Positives = 61/135 (45%)
Frame = +3
Query: 294 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLG 473
E+G + PP I + + LLN+++L+ S +T +H L+ N +K + +TI LG
Sbjct: 110 EVGLMWPPMGINKVDFMTLALLNSVLLLSSAYFLTISHLMLVTLNKMLSKFFMIITIFLG 169
Query: 474 FYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*K 653
F Q EYM L +F F HV++G LF+ + +L K
Sbjct: 170 MVFLGYQMMEYMMLEFLWSDSVYGSIFYMTTSFHAFHVMVG-LFMLSSVL-----TLMTK 223
Query: 654 SSLWV*KLQPXYWAF 698
++ + + YW F
Sbjct: 224 MNMMIFEFSAWYWHF 238
>UniRef50_Q7NIM1 Cluster: Cytochrome c oxidase subunit III; n=1;
Gloeobacter violaceus|Rep: Cytochrome c oxidase subunit
III - Gloeobacter violaceus
Length = 208
Score = 49.6 bits (113), Expect = 7e-05
Identities = 38/129 (29%), Positives = 56/129 (43%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTIL 491
PP+ TP +P + T+IL+ S + A +L + Q + LT +G F
Sbjct: 66 PPAG-TPELEKILPAIFTVILVASSGVIMLAERALKHGDMGQFRLFWLLTTAMGTVFVAG 124
Query: 492 QAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*KSSLWV* 671
QAYE+M L L F F G+HVIIG L + + R F + + +S +
Sbjct: 125 QAYEWMHLEFGLKDGLFGGTFYVLTGFHGMHVIIGLLLQAVVFFRSFKTNHYTPASHFGV 184
Query: 672 KLQPXYWAF 698
YW F
Sbjct: 185 GASSLYWHF 193
>UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Microstomum lineare|Rep: Cytochrome c oxidase subunit 3
- Microstomum lineare
Length = 245
Score = 49.6 bits (113), Expect = 7e-05
Identities = 31/92 (33%), Positives = 44/92 (47%)
Frame = +3
Query: 339 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLL 518
P +PLLNT +L+ SGV+VT H L + N + L T+ LG +F + Q EY +
Sbjct: 115 PAGLPLLNTFLLLSSGVSVTLYHSFLFQGNGGLS--YLIYTLFLGVFFELCQINEYSNSV 172
Query: 519 LQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXI 614
L L F G HV +G + L +
Sbjct: 173 LSLSSFTYGTTFFMLTGLHGFHVFVGIVCLSV 204
>UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;
Cyanobacteria|Rep: Cytochrome c oxidase subunit III -
Synechococcus sp. (strain CC9311)
Length = 217
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/118 (27%), Positives = 53/118 (44%)
Frame = +3
Query: 345 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQ 524
++PL+NT+IL+ S A L + N + LT+ +G YF Q E+ +L
Sbjct: 82 RMPLINTVILVSSSFVAYFAERYLHQKNLWGFRALWLLTMAMGTYFVYGQYVEWSELQFS 141
Query: 525 LLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*KSSLWV*KLQPXYWAF 698
L F F G+HVI G L + + +R F + + K + V + +W F
Sbjct: 142 LSSGVFGGTFFLLTGFHGLHVITGILLMGLMLLRSFRPNNYEKGDMGVTSVS-LFWHF 198
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQL 527
+ LLNT +L+ S TV AHH L F+ + L +TI+LG F ++Q++E+ +
Sbjct: 659 LALLNTFLLVSSSFTVHFAHHDLRRGRFNPFRFGLLVTIILGVLFFLVQSWEFYQFYHHS 718
Query: 528 LIE--FMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ F G+HV+IG L + Y++
Sbjct: 719 SWQENLWTAAFFTIVGLHGLHVVIGGFGLILAYLQ 753
>UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Pellia
epiphylla
Length = 84
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 464 FIRILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHG 577
F+ ++F F I EA FTI+D IYGST F ATGFHG
Sbjct: 23 FLALVFTGFQGIEYVEAPFTISDGIYGSTSFSATGFHG 60
Score = 34.3 bits (75), Expect = 3.0
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +3
Query: 405 HHSLIENN--FSQTKQRLXLTILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMG 578
HH+++ Q T+ L FT Q EY++ + F G
Sbjct: 1 HHAILAGGCFLKQAVYASIATVFLALVFTGFQGIEYVEAPFTISDGIYGSTSFSATGFHG 60
Query: 579 IHVIIGTLFLXICYIRHF 632
HVIIGT+ IC IR +
Sbjct: 61 FHVIIGTISSIICGIRQY 78
>UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n=6;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide
III - Haloarcula marismortui (Halobacterium marismortui)
Length = 287
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +3
Query: 354 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQLLI 533
++NT++LI S VT+ +H +L N S+ + L T+LLG F Q YEY + ++
Sbjct: 151 IVNTLLLIASSVTLHYSHIALRSGNRSRFLKLLGATLLLGIVFIGGQVYEYYEFIVHKGF 210
Query: 534 E----FMDPLFS*QQDFMGIHVIIGTLFLXICYIRHF 632
F G+HV +G + L I +IR +
Sbjct: 211 SIGGGIYGSAFYGLTGLHGLHVTMGAVLLGIVFIRGY 247
>UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9;
Eukaryota|Rep: Cytochrome oxidase subunit 3 -
Dictyostelium discoideum (Slime mold)
Length = 435
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 279 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXL 458
LSPNI IG + PP +T ++ +PLLNT++L+ SG +T + L E K L
Sbjct: 159 LSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVL 218
Query: 459 TI 464
+
Sbjct: 219 AV 220
Score = 40.7 bits (91), Expect = 0.034
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 440 KTKIXFNYFIRILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHG 577
KT++ F ++F + A F++ D IYGS FF+ TGFHG
Sbjct: 322 KTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHG 367
>UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit III;
n=23; Cyanobacteria|Rep: Possible cytochrome c oxidase
subunit III - Synechococcus sp. (strain CC9902)
Length = 209
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQL 527
+P+LNT++L+ S T A ++ ++ ++ ++ L +T LG F I Q EY L L
Sbjct: 77 LPILNTVLLLVSSATFHKAGQAIRNSDHARCRRWLLITASLGIAFLISQMVEYFTLPFGL 136
Query: 528 LIEFMDPLFS*QQDFMGIHVIIGTLFLXICY 620
F F G+HV +G + I +
Sbjct: 137 TDNLYASTFFAVTGFHGLHVTLGAVMTLIVW 167
>UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
CyoC protein - Wigglesworthia glossinidia brevipalpis
Length = 205
Score = 42.7 bits (96), Expect = 0.008
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 FQIPL--LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKL 515
F+IPL L TIIL+ S +T + A S+ +NN +T L +T++LG F ++ E+ L
Sbjct: 64 FEIPLVFLETIILLSSSMTCSIASFSIKKNNKIKTNIWLFITVILGIIFINIEISEFYSL 123
Query: 516 LLQLL----IEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ + F+ F+ G+HVI G +++ + I+
Sbjct: 124 ICKNYGPDRSAFLSIFFT-IVGTHGVHVISGIIWMIVIMIQ 163
>UniRef50_Q06475 Cluster: Cytochrome c oxidase subunit 3 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide III)
(Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3);
n=12; Cyanobacteria|Rep: Cytochrome c oxidase subunit 3
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
(Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3) -
Synechocystis sp. (strain PCC 6803)
Length = 233
Score = 41.5 bits (93), Expect = 0.020
Identities = 32/128 (25%), Positives = 52/128 (40%)
Frame = +3
Query: 315 PSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQ 494
P TP +P +N+IILI S + ++ N+ + ++ +T +G F Q
Sbjct: 91 PPEGTPELELLLPGVNSIILISSSFVMHKGQAAIRNNDNAGLQKWFGITAAMGIIFLAGQ 150
Query: 495 AYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*KSSLWV*K 674
YEY L + L F F G+HV G L + R + ++S + +
Sbjct: 151 MYEYFHLEMGLTTNLFASCFYVLTGFHGLHVTFGLLLILSVLWRSRQPGHYSRTSHFGVE 210
Query: 675 LQPXYWAF 698
YW F
Sbjct: 211 AAELYWHF 218
>UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4;
Venerupis (Ruditapes) philippinarum|Rep: Cytochrome c
oxidase subunit 3 - Venerupis (Ruditapes) philippinarum
Length = 301
Score = 41.1 bits (92), Expect = 0.026
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 473 ILFYYFTSI*IYEASFTIADRIYGSTFFIATGFHG 577
+LF + S Y S+TIAD ++GS+F++ TGFHG
Sbjct: 199 LLFLWVQSEEYYWCSYTIADGVFGSSFYMLTGFHG 233
Score = 39.5 bits (88), Expect = 0.079
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Frame = +3
Query: 312 PPSRITPFNPFQIPLLNTIILIRSGVT------VT*AHHSLIENNFSQTKQ-----RLXL 458
PP + P+++P LN ++L+ SG+ H ++ S + + +
Sbjct: 134 PPVGVKAIYPWRVPFLNLLLLVSSGMFSQASKWAVSCHSKELDTKKSGHYKFAALLSMMV 193
Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ILLG F +Q+ EY + F F G+HV++G FL +C+ R
Sbjct: 194 SILLGLLFLWVQSEEYYWCSYTIADGVFGSSFYMLTGFHGMHVMVGLGFLLVCWFR 249
>UniRef50_P50677 Cluster: Cytochrome c oxidase subunit 3 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide III)
(Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3);
n=10; Cyanobacteria|Rep: Cytochrome c oxidase subunit 3
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
(Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3) -
Synechococcus vulcanus (Thermosynechococcus vulcanus)
Length = 201
Score = 39.5 bits (88), Expect = 0.079
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQL 527
+P +NT+ILI S + ++ +++ ++ +T +G F Q YEY+ L L
Sbjct: 67 VPTINTLILISSSFVIHYGDVAIKKDDVRGMRKWYWITAAMGAVFLGGQVYEYLTLGYGL 126
Query: 528 LIEFMDPLFS*QQDFMGIHVIIGTLFL 608
F F G+HV IG L +
Sbjct: 127 RTNVFANCFYVMTGFHGLHVFIGILLI 153
>UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;
Chloroflexus|Rep: Cytochrome c oxidase, subunit III -
Chloroflexus aggregans DSM 9485
Length = 278
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 357 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
+NT++L+ S +TV A ++ E N + L LT+LLG F +++ YEY
Sbjct: 100 VNTVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGYEY 149
>UniRef50_Q5DNB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Leptorhynchoides thecatus|Rep: Cytochrome c oxidase
subunit 3 - Leptorhynchoides thecatus
Length = 243
Score = 39.1 bits (87), Expect = 0.10
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 345 QIPLLNTIILIRSGVTVT*AHHSLIENNFS-QTKQRLXLTILLGFYFTILQAYEYMKLLL 521
+IPL ++IL+ SGV++T H+ + L LT+ LG+ F ++Q E++ L
Sbjct: 109 EIPLFISVILLSSGVSITIFHNMYCGSYCGVWLIGGLVLTLFLGYLFLLVQKGEWLNSNL 168
Query: 522 QLLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIRHFX*SLF*KSSLWV*KLQPXYWAF 698
F F G+HV++G LFL + + + S W + YW F
Sbjct: 169 SWGDGVFGSFFYMITGFHGLHVLMG-LFLLSFLLYYVITNFGVYFSDWKVECAVWYWHF 226
>UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2;
Chlamydomonadaceae|Rep: Cytochrome c oxidase subunit III
- Chlamydomonas reinhardtii
Length = 382
Score = 38.7 bits (86), Expect = 0.14
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 509 EASFTIADRIYGSTFFIATGFHG 577
E FTI D YG+TFF+ TGFHG
Sbjct: 307 ETPFTITDSPYGTTFFVTTGFHG 329
>UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18;
Eucestoda|Rep: Cytochrome c oxidase subunit 3 -
Diphyllobothrium latum
Length = 216
Score = 38.7 bits (86), Expect = 0.14
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 318 SRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQA 497
S I+ + +IP + +L+ S ++VT HH + + + L LT LLG F ILQ
Sbjct: 81 SFISLSSSLEIPFMGCFLLLGSSISVTGFHHVMF---WPYSWVLLLLTTLLGSGFIILQL 137
Query: 498 YEYMKLLLQLL-IEFMDPLFS*QQDFMGIHVIIGTLFLXI 614
+E+ ++ + L+ F F +HV IG + L I
Sbjct: 138 FEFNEIFINLIDSSFYASCFC-TVGLHFLHVFIGVIGLSI 176
>UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15;
Pectinidae|Rep: Cytochrome c oxidase subunit 3 -
Patinopecten yessoensis (Ezo giant scallop) (Yesso
scallop)
Length = 290
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2
Query: 506 YEASFTIADRIYGSTFFIATGFHG 577
Y A FT+AD IYGS FF TG HG
Sbjct: 179 YTAKFTMADGIYGSCFFALTGLHG 202
>UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase,
subunit III - Planctomyces maris DSM 8797
Length = 326
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 357 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
LNT +LI S V A + NF++ ++ L LT+LL F ++AYEY
Sbjct: 56 LNTFVLILSSYFVVLALEGMKVENFAKARRYLCLTLLLACLFLGIKAYEY 105
>UniRef50_Q6NGA0 Cluster: Cytochrome c oxidase subunit 3; n=46;
Actinomycetales|Rep: Cytochrome c oxidase subunit 3 -
Corynebacterium diphtheriae
Length = 205
Score = 37.9 bits (84), Expect = 0.24
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +3
Query: 354 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLL---LQ 524
L+ TIILI S VT + + ++ LTILLG F + QAYEY L+ +
Sbjct: 73 LVITIILISSSVTAQFGVFAAERGDVFGVRRWFSLTILLGAIFLVGQAYEYFHLVEHGMT 132
Query: 525 LLIEFMDPLFS*QQDFMGIHVIIGTLFLXICYIR 626
+ F F HV+ G L + +R
Sbjct: 133 IQSSVYGSSFFITTGFHAAHVLAGALAFVVVLLR 166
Score = 33.5 bits (73), Expect = 5.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 503 IYEASFTIADRIYGSTFFIATGFH 574
+ E TI +YGS+FFI TGFH
Sbjct: 126 LVEHGMTIQSSVYGSSFFITTGFH 149
>UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3;
Digenea|Rep: Cytochrome c oxidase subunit 3 -
Paragonimus westermani
Length = 214
Score = 37.1 bits (82), Expect = 0.42
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 345 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
++PLL + +LI S VT T HH + L +T+LLG F +LQ +E+
Sbjct: 90 ELPLLGSFLLIGSSVTATTYHHC---RGLEISWVFLGVTVLLGLSFVLLQVFEF 140
>UniRef50_A7BSH5 Cluster: Cytochrome c oxidase aa3, subunit III;
n=1; Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3,
subunit III - Beggiatoa sp. PS
Length = 270
Score = 36.7 bits (81), Expect = 0.55
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 339 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLL 518
P +PL+ T++L+ S T+ A L N+ + K L +T+LLG F + E+ L
Sbjct: 137 PTIMPLIMTLVLVSSSFTIHFAEVKLEHNDRAGFKMWLGITMLLGAIFLSMSIIEWTHLF 196
Query: 519 ---LQLLIEFMDPLFS*QQDFMGIHVIIGT-LFLXI 614
F F G HVI+G +F+ I
Sbjct: 197 HEGFAFWTNIYSTSFFTITGFHGAHVIVGLGIFIAI 232
>UniRef50_A3HUQ8 Cluster: Probable cytochrome-c oxidase
transmembrane protein; n=1; Algoriphagus sp. PR1|Rep:
Probable cytochrome-c oxidase transmembrane protein -
Algoriphagus sp. PR1
Length = 204
Score = 36.3 bits (80), Expect = 0.73
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 354 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQLLI 533
+++T+++I SG T T + E N + + L T+LLG FT+ Q +++ L + +
Sbjct: 62 VVSTVLIILSGYTATKMRYYYQEENTLKLQAALRNTLLLGLAFTLFQLVGWLE-LTNMGV 120
Query: 534 EFMD-PLFS*QQDFMGIHV--IIGTLFLXICYIR 626
F P S GIH+ ++G + I +R
Sbjct: 121 NFTGIPSGSFLYVLSGIHIFHLLGAMIFAIILLR 154
>UniRef50_UPI0000DAE542 Cluster: hypothetical protein
Rgryl_01000587; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000587 - Rickettsiella
grylli
Length = 306
Score = 35.9 bits (79), Expect = 0.97
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQL 527
+PL+N I+L+ S ++ AH+ + N + L I F F I Q Y ++ L
Sbjct: 176 LPLINLIVLLASAFCLSAAHYHFKKINGPYCRLSFNLAICFAFIFVISQFYYFIHSLNTH 235
Query: 528 LIEFMDPLFS*QQDFMGIHV---IIGTLFLXICYIRH 629
+I S F+G H+ + FL Y R+
Sbjct: 236 VITQRGVWGSFLIAFLGFHLLNCVAALFFLLFLYTRY 272
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 35.9 bits (79), Expect = 0.97
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 357 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
LNT+IL+ S V A L S + L +T+LLG F I Q YE+
Sbjct: 691 LNTLILVTSSGVVHKAEQDLHHGRTSWGRLGLFITLLLGAIFMIFQVYEF 740
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 35.9 bits (79), Expect = 0.97
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 363 TIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLL---LQLLI 533
++ LI S +T A L S L LTILLG F Q +EY LL + +
Sbjct: 623 SLFLIASSITFWIAERFLKAGKKSAFVFSLGLTILLGIIFLAGQVWEYTGLLTSDISINT 682
Query: 534 EFMDPLFS*QQDFMGIHVIIGTLFLXI 614
+ F F GIHV G + L +
Sbjct: 683 DLFSATFFTVTGFHGIHVTAGVIALFV 709
>UniRef50_A2D6E2 Cluster: Cytochrome c oxidase subunit 3; n=2;
Gyrodactylus|Rep: Cytochrome c oxidase subunit 3 -
Gyrodactylus salaris (Flatworm)
Length = 212
Score = 35.9 bits (79), Expect = 0.97
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 345 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
++PLL + +L+ S VT T H + + L LTILLG F +LQ EY
Sbjct: 90 ELPLLGSFLLLGSSVTATCYHLQM-----KLSSLHLILTILLGVLFIVLQGVEY 138
>UniRef50_Q67ML0 Cluster: Cytochrome C oxidase subunit III; n=3;
Bacteria|Rep: Cytochrome C oxidase subunit III -
Symbiobacterium thermophilum
Length = 210
Score = 33.9 bits (74), Expect = 3.9
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 333 FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMK 512
FN ++ ++T +L+ S + + A ++ N ++ + +T L+G F QAYE+
Sbjct: 69 FN-IELTTVSTFVLLMSSLAMVLAVNAAQRNEGRAARRWVLVTALMGLTFLGFQAYEFTH 127
Query: 513 LL---LQLLIEFMDPLFS*QQDFMGIHVIIGTLFL 608
L L F F G HV +G ++L
Sbjct: 128 FYHAGLSLSSSVFGTAFYTLTGFHGAHVAVGVIWL 162
>UniRef50_Q9F3S7 Cluster: Cytochrome oxidase subunit III; n=3;
Bacteria|Rep: Cytochrome oxidase subunit III -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 226
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 357 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEY 506
LNTI+L+ S TV A H + + Q L LTI L F +++ +EY
Sbjct: 83 LNTIVLLTSSFTVALAVHYAQLGDKKRLVQNLWLTIALAGVFMVVKYFEY 132
>UniRef50_A0Z309 Cluster: Cytochrome c oxidase, subunit III; n=3;
unclassified Gammaproteobacteria|Rep: Cytochrome c
oxidase, subunit III - marine gamma proteobacterium
HTCC2080
Length = 326
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 473 ILFYYFTSI*IYEA----SFTIADRIYGSTFFIATGFHG 577
I+F + YEA T+ IYGSTFF+ TGFHG
Sbjct: 233 IIFVGLQAAEYYEAYVLFGLTLNSGIYGSTFFMLTGFHG 271
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +3
Query: 348 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLL 521
+ L+NTIIL + T A+ + +N+ T L T+ + YF ++ +E+ +LL+
Sbjct: 681 VGLINTIILFTGTMLFTLAYLGVKRDNYLITLSGLLGTLFMAIYFLTVKYFEWKELLI 738
>UniRef50_A6DSP2 Cluster: Cytochrome c oxidase subunit III; n=1;
Lentisphaera araneosa HTCC2155|Rep: Cytochrome c oxidase
subunit III - Lentisphaera araneosa HTCC2155
Length = 219
Score = 33.1 bits (72), Expect = 6.8
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = +3
Query: 357 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQLLIE 536
+NT+ILI S VT+ A + N + L T+L G F +++ +EY +L I
Sbjct: 76 VNTVILITSSVTMAVAIREVQLNRKGRALALLLFTVLCGMGFLVVKYFEYSH-KFELGI- 133
Query: 537 FMDPLFS*QQDFMGIHVIIGTLFLXICYI 623
F FS FMG H+ L+ I ++
Sbjct: 134 FPGDFFS----FMGDHMSNEHLYFSIYFM 158
>UniRef50_Q9G8R7 Cluster: Cytochrome c oxidase subunit 3; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 3 -
Naegleria gruberi
Length = 297
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 473 ILFYYFTSI*IYEASFT--IADRIYGSTFFIATGFHGXS-CNNWNFISI 610
++F +F + Y A+ T I+D + GS +++ TGFHG C F++I
Sbjct: 190 VIFVFFIQLSEYVATNTLSISDSVVGSCYYLITGFHGLHVCIGLIFLAI 238
>UniRef50_Q1NH56 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas sp. SKA58|Rep: Putative uncharacterized
protein - Sphingomonas sp. SKA58
Length = 193
Score = 32.7 bits (71), Expect = 9.0
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +3
Query: 345 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLXLTILLGFYFTILQAYEYMKLLLQ 524
++ LLNT++L+ S + V A + + + ++ L ILLG F I++A+EY + Q
Sbjct: 60 RLGLLNTLLLLTSSLFVAQAV-AAVRRGDDRARRLLLGAILLGSGFVIVKAFEYSAKIAQ 118
Query: 525 LLIEFMDPLFS*QQDFMGIHVI 590
+ F GIH++
Sbjct: 119 GFTLNSNSFSIYYYMFTGIHLV 140
>UniRef50_Q0LFY5 Cluster: Cytochrome c oxidase, subunit III; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Cytochrome c
oxidase, subunit III - Herpetosiphon aurantiacus ATCC
23779
Length = 208
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 503 IYEASFTIADRIYGSTFFIATGFHG 577
I TI + ++GSTFF TGFHG
Sbjct: 128 IVHEGVTIKNMMFGSTFFFVTGFHG 152
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,239,302
Number of Sequences: 1657284
Number of extensions: 7489146
Number of successful extensions: 12993
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 12573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12886
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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