Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060424.seq
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.45 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.45 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.45 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.8  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFM 542
           T+LLG  F    A+EY++L  Q ++ F+
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFM 542
           T+LLG  F    A+EY++L  Q ++ F+
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 459 TILLGFYFTILQAYEYMKLLLQLLIEFM 542
           T+LLG  F    A+EY++L  Q ++ F+
Sbjct: 442 TLLLGVDFVKEYAFEYIQLYSQFILYFL 469


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 449 IXFNYFIRILFYYFTS---I*IYEASFTIADRIYGSTFFI 559
           + F +FI   FY+FT+   I  Y+  F I + +     F+
Sbjct: 237 VSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFL 276


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 449 IXFNYFIRILFYYFTS---I*IYEASFTIADRIYGSTFFI 559
           + F +FI   FY+FT+   I  Y+  F I + +     F+
Sbjct: 233 VSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFL 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,001
Number of Sequences: 336
Number of extensions: 2354
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)