Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060422.seq
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.80 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   2.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 395 RPFSRNKKPHPPQ 357
           +P+ R KK HPPQ
Sbjct: 43  QPYPRQKKSHPPQ 55


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +1

Query: 445 REGKGGD*DRARRVEEDIGEEKSVMRERERRALVRTMPE 561
           +E +G D D+ +   ED+GE++    ++E +   +T+ E
Sbjct: 233 KEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKE 271


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 326 TVLKIEDRAPVVEDEVFYYVKTDDDVVAAHRFADLTTAPGEKEKXATKI 472
           TVL + +  P  ED    +   +  + A  +  + T  PG K   + +I
Sbjct: 24  TVLSVGNENPPPEDTPLSFKNIESHLNAISQITNSTLDPGRKSPSSPRI 72


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 269 AQLLQRNCELCIVLKHFVIPSIIDSKSLSITSKSRL*SFEAHESKNI 129
           A  L   C L +VL HF+  ++     L     + L   E  E KNI
Sbjct: 168 AYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNI 214


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 269 AQLLQRNCELCIVLKHFVIPSIIDSKSLSITSKSRL*SFEAHESKNI 129
           A  L   C L +VL HF+  ++     L     + L   E  E KNI
Sbjct: 168 AYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNI 214


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 91  ELKLALNKCNSLDMFFDSCASNDHN 165
           EL   +N+C+ L +  D  A   HN
Sbjct: 326 ELSAMVNRCHPLSLSSDHQAMLHHN 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,111
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)