Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060422.seq
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051860-1|AAK93284.1|  594|Drosophila melanogaster LD35730p pro...    30   2.7  
AE014134-1223|AAN10614.1|  594|Drosophila melanogaster CG11266-P...    30   2.7  
AE014134-1222|AAF52478.1|  594|Drosophila melanogaster CG11266-P...    30   2.7  

>AY051860-1|AAK93284.1|  594|Drosophila melanogaster LD35730p
           protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +1

Query: 334 ENRRPRSGCGG*-GFLLRENGR*RRSRAPVRGFDYGPGREGKGGD*DRARRVEEDIGEEK 510
           +++R RS  G   G   R+ G  R S    R  D    R   GGD DR RR   D   E+
Sbjct: 65  QSKRSRSRSGSRDGKSRRDRGNERSSH---RDKDKERDRNRDGGDRDRHRREGGDRDRER 121

Query: 511 SVMRERERRALVRTMPE 561
              RER+R    R+  E
Sbjct: 122 ERERERDRSRRSRSRDE 138


>AE014134-1223|AAN10614.1|  594|Drosophila melanogaster CG11266-PB,
           isoform B protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +1

Query: 334 ENRRPRSGCGG*-GFLLRENGR*RRSRAPVRGFDYGPGREGKGGD*DRARRVEEDIGEEK 510
           +++R RS  G   G   R+ G  R S    R  D    R   GGD DR RR   D   E+
Sbjct: 65  QSKRSRSRSGSRDGKSRRDRGNERSSH---RDKDKERDRNRDGGDRDRHRREGGDRDRER 121

Query: 511 SVMRERERRALVRTMPE 561
              RER+R    R+  E
Sbjct: 122 ERERERDRSRRSRSRDE 138


>AE014134-1222|AAF52478.1|  594|Drosophila melanogaster CG11266-PA,
           isoform A protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +1

Query: 334 ENRRPRSGCGG*-GFLLRENGR*RRSRAPVRGFDYGPGREGKGGD*DRARRVEEDIGEEK 510
           +++R RS  G   G   R+ G  R S    R  D    R   GGD DR RR   D   E+
Sbjct: 65  QSKRSRSRSGSRDGKSRRDRGNERSSH---RDKDKERDRNRDGGDRDRHRREGGDRDRER 121

Query: 511 SVMRERERRALVRTMPE 561
              RER+R    R+  E
Sbjct: 122 ERERERDRSRRSRSRDE 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,657,253
Number of Sequences: 53049
Number of extensions: 537394
Number of successful extensions: 2367
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)