Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060421.seq
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.1  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 146 NLFSTLRVLHSDLVSFL 96
           N+F  L++L++D+V+ L
Sbjct: 352 NVFDVLKLLYNDIVNML 368


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 4/15 (26%), Positives = 12/15 (80%)
 Frame = -3

Query: 454 LLIYVQWMAAASICV 410
           +++Y+ W+A+ + C+
Sbjct: 158 VMVYLAWVASLAFCI 172


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 630 RXLWKNSMWSIXGSPXTPITRVVIVHP 550
           R  + NS W + G     + + + +HP
Sbjct: 32  RYKFHNSRWMVAGKADPEMPKRMYIHP 58


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 630 RXLWKNSMWSIXGSPXTPITRVVIVHP 550
           R  + NS W + G     + + + +HP
Sbjct: 32  RYKFHNSRWMVAGKADPEMPKRMYIHP 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,094
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)