Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060421.seq
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    30   0.075
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.70 
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   5.0  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   5.0  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   5.0  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   5.0  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   6.5  
AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        23   6.5  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        23   6.5  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 29.9 bits (64), Expect = 0.075
 Identities = 15/66 (22%), Positives = 36/66 (54%)
 Frame = -2

Query: 269 RSYEVSFSSTSRQISLSKASAWANSRPSLSRVAGFTGSEAKNLFSTLRVLHSDLVSFLTN 90
           RSY  +   + RQ+++S +  + N    + ++  ++ S   N  S ++V  + ++  ++ 
Sbjct: 325 RSYGTNVRESRRQLNISSSQLFGNGTVPVQQIQLYSRSRVAN--SQIKV--TKMLLIVST 380

Query: 89  IFVCMN 72
           +FVC+N
Sbjct: 381 VFVCLN 386


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 272 SRSYEVSFSSTSRQISLSKASAWANSRPSLSR 177
           SRS  +S SS SR  SLS++ + + SR S SR
Sbjct: 408 SRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSR 439


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 7   SEDLGIHCYLYYIVM 51
           +ED+G++ Y YY +M
Sbjct: 226 TEDIGLNAYYYYFMM 240


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 7   SEDLGIHCYLYYIVM 51
           +ED+G++ Y YY +M
Sbjct: 226 TEDIGLNAYYYYFMM 240


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 7   SEDLGIHCYLYYIVM 51
           +ED+G++ Y YY +M
Sbjct: 226 TEDIGLNAYYYYFMM 240


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 7   SEDLGIHCYLYYIVM 51
           +ED+G++ Y YY +M
Sbjct: 226 TEDIGLNAYYYYFMM 240


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 386 PKSNISRFYTNACCSHPLYID 448
           PK+         CC HPL +D
Sbjct: 21  PKTTACTAGNKRCCRHPLLVD 41


>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 170 GFTGSEAKNLFSTLRVLHSDLVSFLTNIFVCMNFTELHFYI 48
           G T S+   L +   ++  DLV+   NIFV M F E   Y+
Sbjct: 25  GLTKSQKVALIAAWSIVKKDLVTHGRNIFV-MFFEEYPQYL 64


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 170 GFTGSEAKNLFSTLRVLHSDLVSFLTNIFVCMNFTELHFYI 48
           G T S+   L +   ++  DLV+   NIFV M F E   Y+
Sbjct: 25  GLTKSQKVALIAAWSIVKKDLVTHGRNIFV-MFFEEYPQYL 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,328
Number of Sequences: 2352
Number of extensions: 12963
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)