Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060420.seq
(536 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 58 1e-07
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 58 1e-07
UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;... 58 2e-07
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 55 1e-06
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 47 2e-04
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 46 4e-04
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 46 4e-04
UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.001
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 45 0.001
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 41 0.016
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 40 0.048
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 39 0.063
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 38 0.15
UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 37 0.26
UniRef50_Q4SAL9 Cluster: Chromosome undetermined SCAF14682, whol... 37 0.34
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 36 0.59
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 35 1.4
UniRef50_UPI00015554B1 Cluster: PREDICTED: similar to regulator ... 34 1.8
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 34 1.8
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 34 1.8
UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2; Ara... 34 1.8
UniRef50_UPI000155CCB4 Cluster: PREDICTED: similar to interferon... 34 2.4
UniRef50_UPI000049A2CF Cluster: zinc finger protein; n=1; Entamo... 33 3.1
UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;... 33 3.1
UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11... 33 3.1
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 33 4.2
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 33 4.2
UniRef50_Q16TE2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 32 7.3
UniRef50_A7H885 Cluster: Signal recognition particle-docking pro... 32 7.3
UniRef50_A6GDD2 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 32 7.3
UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep: ... 32 7.3
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 32 7.3
UniRef50_Q09507 Cluster: Uncharacterized protein C45G9.9; n=2; C... 32 7.3
UniRef50_UPI000069DD7A Cluster: UPI000069DD7A related cluster; n... 32 9.6
UniRef50_Q18VY0 Cluster: Rhodanese-like precursor; n=4; Desulfit... 32 9.6
UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6; ... 32 9.6
UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4; rosids... 32 9.6
UniRef50_Q0U0X5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10345,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 662
Score = 58.0 bits (134), Expect = 1e-07
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +2
Query: 401 HTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
++VHWFRKG R+HDNPAL+E + A + RCV+++DP
Sbjct: 4 NSVHWFRKGLRLHDNPALQEALSGADSLRCVYVLDP 39
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 58.0 bits (134), Expect = 1e-07
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +2
Query: 401 HTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
++VHWFRKG R+HDNPAL+E + A + RCV+++DP
Sbjct: 4 NSVHWFRKGLRLHDNPALQEALSGADSLRCVYVLDP 39
>UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 487
Score = 57.6 bits (133), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +2
Query: 401 HTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
+++HWFRKG R+HDNPAL+E + A T RCV+ +DP
Sbjct: 428 NSIHWFRKGLRLHDNPALQEAVRGADTVRCVYFLDP 463
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 377 APRRTPGKHT---VHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
AP PG + VHWFRKG R+HDNPAL + A RCV+I+DP
Sbjct: 12 APAPAPGTDSASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDP 58
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 338 AQAHTPARPXHMSAPRRTPGKH---TVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
A A TP++ S T ++ WFRKG R+HDNPALR+ + +FIIDP
Sbjct: 26 AAARTPSKSSSTSRMASTSSGQQGRSILWFRKGLRLHDNPALRDACTGSAAVFPIFIIDP 85
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 46.4 bits (105), Expect = 4e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 404 TVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
T+ WFRK R+HDNPAL G + A + VF++DP
Sbjct: 1101 TLVWFRKALRVHDNPALSRGTLHATACQPVFVLDP 1135
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 395 GKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGS 514
G ++HWFRK R+HDNPAL E + F V+ +DP S
Sbjct: 15 GISSMHWFRKDLRLHDNPALLESFKNCQAFYGVYFLDPAS 54
>UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 159
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 398 KHT-VHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPAL 523
+HT HWFRK R+HDNPAL++ + +A F VF++ P++
Sbjct: 5 RHTSCHWFRKDLRLHDNPALKDALDNADCFYGVFVLSNFHPSI 47
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 395 GKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
G ++ WFRKG RIHDNPAL+ ++ VF+IDP
Sbjct: 4 GSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDP 41
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 41.1 bits (92), Expect = 0.016
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 395 GKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
G ++ WFRKG R+HDNPAL + VF+IDP
Sbjct: 4 GSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDP 41
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 39.5 bits (88), Expect = 0.048
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 404 TVHWFRKGXRIHDNPALREGIIDAVTFRCVFIID 505
T+H FRKG R+HDNP+L + + T V+++D
Sbjct: 26 TIHLFRKGLRLHDNPSLLGALASSSTLYPVYVLD 59
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 39.1 bits (87), Expect = 0.063
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 398 KHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
K + WFR R+HDNPAL CVFIIDP
Sbjct: 10 KRGIFWFRHDLRLHDNPALVALSEQVDELLCVFIIDP 46
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 413 WFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPA 520
WFR+ R+HDNPAL + C FI DP + A
Sbjct: 13 WFRRDLRLHDNPALWAAVRSGRPLVCAFIDDPDAVA 48
>UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Gluconobacter oxydans|Rep: Deoxyribodipyrimidine
photolyase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 479
Score = 37.1 bits (82), Expect = 0.26
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 371 MSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPALQTL 532
MS+ + P + WFR R+ D+PAL E C++I+D +PAL L
Sbjct: 1 MSSSQNRPA---IVWFRDDLRMADHPALHEAAASGWPLICLYILDDVTPALHPL 51
>UniRef50_Q4SAL9 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 44
Score = 36.7 bits (81), Expect = 0.34
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 401 HTVHWFRKGXRIHDNPALREG 463
+++HWFRKG R+HDNP G
Sbjct: 1 NSIHWFRKGLRLHDNPVASGG 21
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 35.9 bits (79), Expect = 0.59
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 413 WFRKGXRIHDNPALREGIIDAVTFRCVFIID 505
WFR+ R+HDN AL + + CVFI D
Sbjct: 2 WFRRDLRLHDNHALHHALSQSDNVYCVFIFD 32
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 413 WFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
WFR R+ DNPALR +A +F+I P
Sbjct: 5 WFRNDLRLADNPALRHACAEAGEVAALFVISP 36
>UniRef50_UPI00015554B1 Cluster: PREDICTED: similar to regulator of
G-protein signalling 12; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to regulator of
G-protein signalling 12 - Ornithorhynchus anatinus
Length = 288
Score = 34.3 bits (75), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 317 ETLPPPSAQAHTPARPXHMSAPRRTPGKHTVHW 415
ET PPP PA P ++ PRR PG+ + W
Sbjct: 219 ETEPPPRRSPLGPAGPGPLAGPRRPPGRGLLDW 251
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 392 PGKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
P V WFR+ R+ DNPAL E D +F++DP
Sbjct: 3 PSTPAVLWFRRDLRLADNPALVEAAADGPVLP-LFVLDP 40
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2;
Arabidopsis thaliana|Rep: Blue-light photoreceptor PHR2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 447
Score = 34.3 bits (75), Expect = 1.8
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 IETKMSAAPETLPPP-SAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGI 466
I K + A L P S P P +A RR V WFR R+HDN L
Sbjct: 82 ISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRA----AVVWFRNDLRVHDNECLNSAN 137
Query: 467 IDAVTFRCVFIIDP 508
+ V+ V+ DP
Sbjct: 138 DECVSVLPVYCFDP 151
>UniRef50_UPI000155CCB4 Cluster: PREDICTED: similar to interferon
receptor type 1; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to interferon receptor type 1 -
Ornithorhynchus anatinus
Length = 730
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +2
Query: 302 MSAAPETLPPPSAQAHTPARPXHMSAPRRTPG 397
M + P LPPPSAQA PA P M +PR PG
Sbjct: 1 MCSDPRPLPPPSAQAR-PA-PGRMRSPRSLPG 30
>UniRef50_UPI000049A2CF Cluster: zinc finger protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: zinc finger protein -
Entamoeba histolytica HM-1:IMSS
Length = 507
Score = 33.5 bits (73), Expect = 3.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 496 KDASECDSVYNALXKGGVIVDSXSFPEPMHGVFTRRTSRCGHMXRPGRRVSLSTWWWQC 320
K+ SE +S+Y + +++S S P G+ T RT C HM P W W C
Sbjct: 289 KELSEWESLYQEDSESMRMIESISKPCFHCGLMTERTKGCNHMTCPRCH---GEWCWMC 344
>UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 518
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 380 PRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPALQTL 532
P ++ + WFR R+ D PAL + CVF+ D G A + L
Sbjct: 28 PAKSSVAPAIVWFRDDLRVTDQPALTRAVESGRPLVCVFVDDTGDGAGRAL 78
>UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Arthrobacter sp. (strain FB24)
Length = 474
Score = 33.5 bits (73), Expect = 3.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 404 TVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPALQTL 532
T+ W R R+ DNPAL + V+I+D SP ++ L
Sbjct: 4 TIVWLRDDLRLDDNPALADAAAMGHPLTVVYILDEESPGVRPL 46
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 33.1 bits (72), Expect = 4.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 395 GKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPAL 523
G H + WF++ R+HD+ AL + ++I +PG AL
Sbjct: 9 GVHVI-WFKRDLRVHDHAALAAAVASGAPILPLYIFEPGYWAL 50
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 33.1 bits (72), Expect = 4.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 395 GKHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPALQTLA 535
G WFR R+ D PAL DA++ +++ DP TLA
Sbjct: 18 GTARAFWFRTDLRLDDQPALSTACEDALSLLPIYVFDPAKFIDLTLA 64
>UniRef50_Q16TE2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 189
Score = 32.7 bits (71), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 290 IETKMSAAPETLPPPSAQAHTPARPXHMSAPRRTPG 397
IET +A P T P P TP P +AP TPG
Sbjct: 54 IETTTTAIPPTPPSPDGPTLTPPPPVTTAAPGPTPG 89
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 32.7 bits (71), Expect = 5.5
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGI-IDAVTFRCVFIIDP 508
++WFR R+HD+PAL+ + +D +F DP
Sbjct: 7 IYWFRTDLRLHDSPALQAALDLDPAVLWPIFTWDP 41
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 32.3 bits (70), Expect = 7.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 413 WFRKGXRIHDNPALREGIIDAVTFRCVFIIDPGSPA 520
WFR+ R+ DNPAL + CV++ + G+ A
Sbjct: 10 WFREDLRLTDNPALNAAVNSGRPLICVYLRETGAGA 45
>UniRef50_A7H885 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Cystobacterineae|Rep: Signal
recognition particle-docking protein FtsY -
Anaeromyxobacter sp. Fw109-5
Length = 465
Score = 32.3 bits (70), Expect = 7.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 ETKMSAAPETLPPPSAQAHTPA-RPXHMSAPRRTP 394
E ++ A PE LPPPSA+ PA P + AP P
Sbjct: 53 ERELRAGPEALPPPSAKLPPPAPPPARVPAPPPAP 87
>UniRef50_A6GDD2 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 371
Score = 32.3 bits (70), Expect = 7.3
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 314 PETLPPPSAQAHTPARPXHMSAPRRTPGKHTVHWF-RKGXRIHDNPALREGIIDAVTFRC 490
P T P AHT +R MS + F + + D R G++ AVTF
Sbjct: 141 PGTAEPNVVYAHTSSRLYTMSPFDYAIAEAGQFTFDQSSGSVTDIAIDRWGVLYAVTFND 200
Query: 491 VFIIDPGSPALQTLA 535
+F+ DPGS A LA
Sbjct: 201 LFVCDPGSAACIYLA 215
>UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Reinekea sp. MED297|Rep: Deoxyribodipyrimidine
photolyase - Reinekea sp. MED297
Length = 433
Score = 32.3 bits (70), Expect = 7.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 413 WFRKGXRIHDNPALREGIIDAVTFRCVFIIDPG 511
WF + R+ DNPALR +A CVF+++ G
Sbjct: 2 WFTQDQRLDDNPALRLA-AEADEMLCVFVVEQG 33
>UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep:
Cryptochrome 2 - Oryza sativa (Rice)
Length = 651
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 398 KHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
+ TV WFR+ RI DNPAL D V VFI P
Sbjct: 5 ERTVVWFRRDLRIDDNPALAAAARDGVVLP-VFIWCP 40
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 32.3 bits (70), Expect = 7.3
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGI-IDAVTFRCVFIIDP 508
+ W R R+HDNPAL+ + ++ TF +F DP
Sbjct: 10 IFWHRTDLRLHDNPALQAALSLNPSTFIPIFTWDP 44
>UniRef50_Q09507 Cluster: Uncharacterized protein C45G9.9; n=2;
Caenorhabditis elegans|Rep: Uncharacterized protein
C45G9.9 - Caenorhabditis elegans
Length = 294
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 299 KMSAAPETLPPPSAQA-HTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDN 445
+M AP TLPPPSA++ H P P ++ R ++T + K + D+
Sbjct: 162 QMVTAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSKEDQDDDD 211
>UniRef50_UPI000069DD7A Cluster: UPI000069DD7A related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069DD7A UniRef100 entry -
Xenopus tropicalis
Length = 184
Score = 31.9 bits (69), Expect = 9.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 311 APETLPPPSAQAHTPARPXHMSAPRRTPGKH 403
AP PP + H PA P H AP + P +H
Sbjct: 122 APPPATPPISTKHPPAPPQHPPAPSQCPPQH 152
>UniRef50_Q18VY0 Cluster: Rhodanese-like precursor; n=4;
Desulfitobacterium hafniense|Rep: Rhodanese-like
precursor - Desulfitobacterium hafniense (strain DCB-2)
Length = 298
Score = 31.9 bits (69), Expect = 9.6
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 233 LLLAMNLVFSVIRGCX*ELIETKMSAAPETLPPPSAQAHTPARPXHMSAPRRTPGKHTVH 412
L++++ LV S++ GC T + P + P A+ TPA+P +A T +T+
Sbjct: 13 LVISLLLVLSLVTGCGSAPASTTPAQPPASQEP--AKPETPAQPEQPAATAPTVESNTLG 70
Query: 413 W 415
W
Sbjct: 71 W 71
>UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6;
Francisella tularensis|Rep: Deoxyribodipyrimidine
photolyase - Francisella tularensis subsp. novicida
(strain U112)
Length = 464
Score = 31.9 bits (69), Expect = 9.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 398 KHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIID 505
K +HWFR+ R+ DNPAL + T +FI+D
Sbjct: 4 KIAIHWFRQDLRLADNPALYQASQADETI-TIFILD 38
>UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4;
rosids|Rep: Cryptochrome 2A apoprotein - Pisum sativum
(Garden pea)
Length = 629
Score = 31.9 bits (69), Expect = 9.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 404 TVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
T+ WFR+ RI DNPAL D F VFI P
Sbjct: 6 TIVWFRRDLRIEDNPALAAAARDGSVFP-VFIWCP 39
>UniRef50_Q0U0X5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 31.9 bits (69), Expect = 9.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 305 SAAPETLPPPSAQAHTPARPXHMSAPRRTP 394
S+ P T PPPS A PA P + RR P
Sbjct: 136 SSPPSTTPPPSPPATNPASPLNRPPSRRPP 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,379,209
Number of Sequences: 1657284
Number of extensions: 7608062
Number of successful extensions: 27134
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 25438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27055
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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