Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060420.seq
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    69   3e-14
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   1.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   9.1  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   9.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   9.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 68.5 bits (160), Expect = 3e-14
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 398 KHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
           KH VHWFR+G R+HDNP+LREG+  A TFRCVF++DP
Sbjct: 17  KHMVHWFRRGLRLHDNPSLREGLKGARTFRCVFVLDP 53


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 153 QDSDVYVHRTQLYLHKQKCIANIIFL 230
           QDS  Y++R++L   K     N IFL
Sbjct: 2   QDSFQYINRSELITSKIVSFVNSIFL 27


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 317 ETLPPPSAQAHTPARPXHMSAPR 385
           E+L P SA      +P H S PR
Sbjct: 53  ESLSPSSAHTVLIPQPLHPSVPR 75


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 449 ALREGIIDAVTFRC 490
           +L+ GI+D++ F+C
Sbjct: 37  SLQVGILDSLVFKC 50


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 498 IKTHRNVTASIMPSRRAGLSWIRNPFRNQCTVCLPGVRRGADI 370
           +K H   ++  +   R  +    N F+N  ++  PGV    D+
Sbjct: 397 VKYHNKTSSVPIYFYRMSIETDLNLFKNMFSITEPGVSHADDL 439


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 498 IKTHRNVTASIMPSRRAGLSWIRNPFRNQCTVCLPGVRRGADI 370
           +K H   ++  +   R  +    N F+N  ++  PGV    D+
Sbjct: 397 VKYHNKTSSVPIYFYRMSIETDLNLFKNMFSITEPGVSHADDL 439


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 498 IKTHRNVTASIMPSRRAGLSWIRNPFRNQCTVCLPGVRRGADI 370
           +K H   ++  +   R  +    N F+N  ++  PGV    D+
Sbjct: 397 VKYHNKTSSVPIYFYRMSIETDLNLFKNMFSITEPGVSHADDL 439


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 498 IKTHRNVTASIMPSRRAGLSWIRNPFRNQCTVCLPGVRRGADI 370
           +K H   ++  +   R  +    N F+N  ++  PGV    D+
Sbjct: 397 VKYHNKTSSVPIYFYRMSIETDLNLFKNMFSITEPGVSHADDL 439


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 498 IKTHRNVTASIMPSRRAGLSWIRNPFRNQCTVCLPGVRRGADI 370
           +K H   ++  +   R  +    N F+N  ++  PGV    D+
Sbjct: 396 VKYHNKTSSVPIYFYRMSIETDLNLFKNMFSITEPGVSHADDL 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,430
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)