Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060420.seq
         (536 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    75   2e-15
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    33   0.008
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   3.7  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 74.5 bits (175), Expect = 2e-15
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 398 KHTVHWFRKGXRIHDNPALREGIIDAVTFRCVFIIDP 508
           KHTVHWFRKG R+HDNPALREG+  A TFRCVFIIDP
Sbjct: 4   KHTVHWFRKGLRLHDNPALREGLRGARTFRCVFIIDP 40


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 32.7 bits (71), Expect = 0.008
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 401 HTVHWFRKGXRIHDNPALREGI 466
           + + WFR G R+HDNP+L E +
Sbjct: 4   NNILWFRHGLRLHDNPSLLEAL 25


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 346 SLSTWWWQCFW 314
           S S WWW+ +W
Sbjct: 4   SRSCWWWRWWW 14


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,419
Number of Sequences: 2352
Number of extensions: 8259
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)