Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060420.seq
(536 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase pro... 42 7e-04
AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p pro... 42 7e-04
AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB... 42 7e-04
AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA... 42 7e-04
AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p pro... 34 0.11
AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome... 34 0.11
AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA... 34 0.11
AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light p... 34 0.11
AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light r... 34 0.11
BT014662-1|AAT27286.1| 153|Drosophila melanogaster GM17393p pro... 29 3.0
X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein p... 28 7.0
BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p pro... 28 7.0
AL009195-2|CAA15706.1| 1192|Drosophila melanogaster EG:30B8.2,FB... 28 7.0
AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein... 28 7.0
AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA ... 28 7.0
AE013599-3180|AAM70866.1| 189|Drosophila melanogaster CG30386-P... 28 7.0
AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p pro... 28 9.3
>D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase
protein.
Length = 540
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIIDA------VTFRCVFIIDPG 511
VHWFRKG R+HDNPAL A R +FI+DPG
Sbjct: 9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPG 49
>AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p
protein.
Length = 540
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIIDA------VTFRCVFIIDPG 511
VHWFRKG R+HDNPAL A R +FI+DPG
Sbjct: 9 VHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPG 49
>AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB,
isoform B protein.
Length = 540
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIIDA------VTFRCVFIIDPG 511
VHWFRKG R+HDNPAL A R +FI+DPG
Sbjct: 9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPG 49
>AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA,
isoform A protein.
Length = 540
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIIDA------VTFRCVFIIDPG 511
VHWFRKG R+HDNPAL A R +FI+DPG
Sbjct: 9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPG 49
>AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p
protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome
protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA
protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light
photoreceptor protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light
receptor protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 407 VHWFRKGXRIHDNPALREGIID---AVTFRCVFIID 505
V WFR G R+HDNPAL + D + VFI D
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFD 43
>BT014662-1|AAT27286.1| 153|Drosophila melanogaster GM17393p
protein.
Length = 153
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 293 ETKMSAAPETLPPPSAQAHTPARPXHMSAPRRTPG 397
ET +AP T P P+ A T A P + P PG
Sbjct: 118 ETPAPSAPATSPQPAVTALTTAAPPTAAPPTAAPG 152
>X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein
protein.
Length = 1090
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 323 LPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVT 481
+PPP + P + +RTP + +RK +IH N GI+ VT
Sbjct: 343 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH-NKLPEGGILIFVT 394
>BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p
protein.
Length = 1192
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 323 LPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVT 481
+PPP + P + +RTP + +RK +IH N GI+ VT
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH-NKLPEGGILIFVT 483
>AL009195-2|CAA15706.1| 1192|Drosophila melanogaster
EG:30B8.2,FBgn0001330;kz protein.
Length = 1192
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 323 LPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVT 481
+PPP + P + +RTP + +RK +IH N GI+ VT
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH-NKLPEGGILIFVT 483
>AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein
protein.
Length = 1192
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 323 LPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVT 481
+PPP + P + +RTP + +RK +IH N GI+ VT
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH-NKLPEGGILIFVT 483
>AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA
protein.
Length = 1192
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 323 LPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIIDAVT 481
+PPP + P + +RTP + +RK +IH N GI+ VT
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIH-NKLPEGGILIFVT 483
>AE013599-3180|AAM70866.1| 189|Drosophila melanogaster CG30386-PA
protein.
Length = 189
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 293 ETKMSAAPETLPPPSAQAHTPARPXHMSAPRRTPGKHTVHWFRKGXRIHDNPALREGIID 472
+ + S A ET P + + TPA S+P RT G T+ HD +L + +++
Sbjct: 11 QKRASIAEET---PVSDSTTPATTASPSSPSRTAGHSTIGALVSNLHHHDIQSLHQPLLE 67
Query: 473 A 475
+
Sbjct: 68 S 68
>AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p
protein.
Length = 558
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 305 SAAPETLPPPSAQAHTPARPXHMSAPRRTPGKHTV 409
+ P + P SA+A TP P ++AP TP + V
Sbjct: 514 ATTPTSTTPTSARARTPTNPVAVTAP-NTPKRQAV 547
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,907,614
Number of Sequences: 53049
Number of extensions: 357461
Number of successful extensions: 1347
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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