Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060418.seq
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    30   6.2  
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance...    30   6.2  
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.              30   6.2  
BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.       29   8.2  
AK096929-1|BAC04901.1|  567|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
            protein protein.
          Length = 3703

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 313  PETLPXPSAQAHXPARPXHMSAPRR 387
            P++ P PS  +H P +P H S P++
Sbjct: 2495 PQSSPSPSQLSHLPLKPLHTSTPQQ 2519


>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
            binding protein protein.
          Length = 2783

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 313  PETLPXPSAQAHXPARPXHMSAPRR 387
            P++ P PS  +H P +P H S P++
Sbjct: 1581 PQSSPSPSQLSHLPLKPLHTSTPQQ 1605


>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
          Length = 2553

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 313  PETLPXPSAQAHXPARPXHMSAPRR 387
            P++ P PS  +H P +P H S P++
Sbjct: 1345 PQSSPSPSQLSHLPLKPLHTSTPQQ 1369


>BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.
          Length = 913

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 24/92 (26%), Positives = 37/92 (40%)
 Frame = +1

Query: 274 MEIGAIETKXSXAPETLPXPSAQAHXPARPXHMSAPRRTPGKHTVHWXRKRCEXTITPAF 453
           ME+G+ E K     E L           +P  +  P RT  +    W RK CE + T A 
Sbjct: 1   MEVGSEEEKW----EKLDAEFDHFVVDMKPFVLKLPHRTERQRCALWIRKLCEPSGTGAG 56

Query: 454 XMAYRRCHIXMRLYNXXXVRQALQNGWLKQME 549
            M  +  ++  +L      R AL+  +  + E
Sbjct: 57  IMGRKNRNLYAKLLLHMLKRGALEGPFTHRPE 88


>AK096929-1|BAC04901.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39610 fis, clone SKNSH2008777. ).
          Length = 567

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 24/92 (26%), Positives = 37/92 (40%)
 Frame = +1

Query: 274 MEIGAIETKXSXAPETLPXPSAQAHXPARPXHMSAPRRTPGKHTVHWXRKRCEXTITPAF 453
           ME+G+ E K     E L           +P  +  P RT  +    W RK CE + T A 
Sbjct: 1   MEVGSEEEKW----EKLDAEFDHFVVDMKPFVLKLPHRTERQRCALWIRKLCEPSGTGAG 56

Query: 454 XMAYRRCHIXMRLYNXXXVRQALQNGWLKQME 549
            M  +  ++  +L      R AL+  +  + E
Sbjct: 57  IMGRKNRNLYAKLLLHMLKRGALEGPFTHRPE 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,729,918
Number of Sequences: 237096
Number of extensions: 1046902
Number of successful extensions: 1669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)