Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060417.seq
         (682 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q65FY1 Cluster: Putative uncharacterized protein; n=1; ...    36   0.69 
UniRef50_A2F7A2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_UPI000155E291 Cluster: PREDICTED: similar to olfactory ...    33   6.4  
UniRef50_Q1K1L3 Cluster: Putative uncharacterized protein precur...    33   8.5  

>UniRef50_Q65FY1 Cluster: Putative uncharacterized protein; n=1;
           Bacillus licheniformis ATCC 14580|Rep: Putative
           uncharacterized protein - Bacillus licheniformis (strain
           DSM 13 / ATCC 14580)
          Length = 416

 Score = 36.3 bits (80), Expect = 0.69
 Identities = 24/63 (38%), Positives = 32/63 (50%)
 Frame = -2

Query: 642 FMLFESIILRTNSFFFAGSDCLLILASDILRGDVAIHTCLAFVFLAGATWIALSLLHLFS 463
           F+  E+++L  N+FF   S C L  A  +L G +    CL   FL G      +LL LFS
Sbjct: 329 FLNVETLVLIANAFFICNSLCGLAAAYKLLSGRIYKKVCL---FLMG----GFTLLLLFS 381

Query: 462 SGW 454
           S W
Sbjct: 382 SSW 384


>UniRef50_A2F7A2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1022

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 482 DKAIQVAPARNTKARQVCIATSPLNISEASISKQSEPAKKK 604
           D +     AR+T++R+V   + P+N+ EA ++K  E  KKK
Sbjct: 445 DDSFTQTTARSTRSRRVSNMSDPINLLEAKVAKLEEELKKK 485


>UniRef50_UPI000155E291 Cluster: PREDICTED: similar to olfactory
           receptor Olr809; n=3; Laurasiatheria|Rep: PREDICTED:
           similar to olfactory receptor Olr809 - Equus caballus
          Length = 407

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/52 (30%), Positives = 32/52 (61%)
 Frame = -1

Query: 481 ITTPIFKWLDILTTRWQRYNNTTHLIFSRLFNFLDNSESLPFHKCRPRFTMS 326
           + TP++ +L +L+     Y+N+  ++   L +FL  S+S+PFH C  + ++S
Sbjct: 63  LNTPMYFFLSVLSFVDICYSNS--IVPQMLVHFLSTSKSIPFHNCLLQLSIS 112


>UniRef50_Q1K1L3 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
           Putative uncharacterized protein precursor -
           Desulfuromonas acetoxidans DSM 684
          Length = 162

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +2

Query: 410 MCRIIIPLPSCSQDVQPLENRCSNDKAIQVAPARNTKARQVCIATSPLNISEASISK 580
           M  +++ + +CS D  P ++  S  KAIQ AP +  +  QV +A  P  ++E S+ +
Sbjct: 8   MTVLLLSMTACSSDEAPTQHAASLSKAIQEAP-QPVEEPQV-VAAEPETVAEESVEQ 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,045,035
Number of Sequences: 1657284
Number of extensions: 11031956
Number of successful extensions: 23768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23763
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)