Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060417.seq
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   0.76 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.8  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   3.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 675 PKKYVYA*SHVFMLFESIILR 613
           P  Y Y  S VF+L E ++LR
Sbjct: 158 PSVYTYEVSPVFVLMEEVVLR 178


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 520 LCVPCWSYLDSFVITTPIFKWLDILTTRWQRYNNTTHLIFSRL 392
           +CV  W+  D   + T I  W+ +L  +W   N    LI  R+
Sbjct: 484 ICVSAWNPKDCDPLITLIETWMPLL-PQWILDNIYDQLIMPRI 525


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 529 LPCLCVPCWSYLDSFVITTPIFKWLD 452
           L C+C PC    +S VI   I  + D
Sbjct: 123 LECMCRPCTGVEESAVIPQEIAGYAD 148


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 409 LIFSRLFNFLDNSESLPFHKCRPRF 335
           LIF    +FLDN +++ + K    F
Sbjct: 225 LIFFATLDFLDNVDTIMYEKTNVTF 249


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/27 (22%), Positives = 15/27 (55%)
 Frame = -3

Query: 233 LHIILHVVFQLCELLTYLFYTFIAISI 153
           +H++ + V  +   + Y +Y FI  ++
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTV 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,432
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)