Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060417.seq
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071434-1|AAL49056.1|  387|Drosophila melanogaster RE52086p pro...    30   3.4  
AL109630-13|CAB51683.1|  426|Drosophila melanogaster EG:BACR7A4....    30   3.4  
AE014298-139|AAF45577.3|  387|Drosophila melanogaster CG11638-PA...    30   3.4  

>AY071434-1|AAL49056.1|  387|Drosophila melanogaster RE52086p
           protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 446 QDVQPLENRCSNDKAIQVAPARNTKARQVCIATSPLNI 559
           Q  +P   R S   A+ V   R TK RQ+C A+S L +
Sbjct: 149 QSSKPEGRRPSARTALSVRSRRKTKTRQICYASSDLEL 186


>AL109630-13|CAB51683.1|  426|Drosophila melanogaster EG:BACR7A4.12
           protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 446 QDVQPLENRCSNDKAIQVAPARNTKARQVCIATSPLNI 559
           Q  +P   R S   A+ V   R TK RQ+C A+S L +
Sbjct: 188 QSSKPEGRRPSARTALSVRSRRKTKTRQICYASSDLEL 225


>AE014298-139|AAF45577.3|  387|Drosophila melanogaster CG11638-PA
           protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 446 QDVQPLENRCSNDKAIQVAPARNTKARQVCIATSPLNI 559
           Q  +P   R S   A+ V   R TK RQ+C A+S L +
Sbjct: 149 QSSKPEGRRPSARTALSVRSRRKTKTRQICYASSDLEL 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,230,406
Number of Sequences: 53049
Number of extensions: 502860
Number of successful extensions: 973
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)