Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060415.seq
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.7  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +3

Query: 186 LDRGKAPPSGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXK 341
           LD+G+  P G+  +      L  D A+    +      + H ++ N  DM K
Sbjct: 46  LDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNKPDMWK 97


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 184 GTRREEHHLLRNRP 143
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 312 IVTNWXDMXKIWHHTFYNELRVAPEXHPVLLT 407
           +VT+W +  +I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 184 GTRREEHHLLRNRP 143
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 184 GTRREEHHLLRNRP 143
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 281 PDPQIPHRTRNRH 319
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 396 RGVPRGRHAAHCRRYDAKSSP 334
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 186 LDRGKAPPSGRD 221
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 186 LDRGKAPPSGRD 221
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,153
Number of Sequences: 336
Number of extensions: 2875
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)