Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060415.seq
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 172 1e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 172 1e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 172 1e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 172 1e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 172 1e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 172 1e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 172 1e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 1e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 172 1e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 172 1e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 168 2e-42
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 122 2e-28
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 122 2e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 112 2e-25
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 9e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 5e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 33 0.14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 33 0.14
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 142 SLYASGRTTGIVLDSGDGV 160
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 120 bits (289), Expect = 7e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 142 SLYASGRTTGIVLDSGDGV 160
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAV 96
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 98 SLYASGRTTGVVLDSGDGV 116
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 220 MVGMGQKDSYVGMRHRAK 273
MVGMGQKDSYVG ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAV 126
Score = 84.6 bits (200), Expect = 4e-17
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +1
Query: 142 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 128 SLYASGRTTGVVLDSGDGV 146
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 79/84 (94%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAV 140
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT G+VLDSGDGV
Sbjct: 142 SLYASGRTTGVVLDSGDGV 160
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 168 bits (409), Expect = 2e-42
Identities = 76/84 (90%), Positives = 78/84 (92%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIVTNW DM KIWHHTFYNELR+APE HPVLLTEAPLNPK+N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYV IQAV
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAV 139
Score = 116 bits (280), Expect = 9e-27
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +1
Query: 94 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLD+GDGV
Sbjct: 141 SLYASGRTTGIVLDTGDGV 159
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKI 344
DEAQSKRGILTLKYPIEHGIVTNW DM KI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKI 344
DEAQSKRGILTLKYPIEHGIVTNW DM KI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKI 344
DEAQSKRGILTLKYPIEHGIVTNW DM KI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 AK 273
+K
Sbjct: 61 SK 62
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDM 335
DEAQSKRGILTLKYPIEHGIVTNW DM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 112 bits (269), Expect = 2e-25
Identities = 47/84 (55%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 EAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTF-YNELRVAPEXHPVLLTEAPLNPKAN 434
+A+S RG+ +++YP+EHGIV NW DM KIW + F ++L++ PE HPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
E+ I FETFN PA+Y+ +QAV
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAV 143
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 255
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYA+GRT G+VLDSGDGV
Sbjct: 145 SLYATGRTTGVVLDSGDGV 163
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 90.2 bits (214), Expect = 9e-19
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +3
Query: 216 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNE-LRVAPEXH 392
R G + L+ +E R +L + YP+++GIV NW DM +W HTF E L + P+
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 393 PVLLTEAPLNPKANXEKMTXIMFETFNTPAMYVAIQAV 506
+LLTE PLNP +N EKM +MFE + ++YVA+QAV
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAV 143
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 204
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
+LYA G G+V+DSGDGV
Sbjct: 145 TLYAQGLLTGVVVDSGDGV 163
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 87.8 bits (208), Expect = 5e-18
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 DEAQSKRGI-LTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKA 431
DEA S T+KYPI HGIV +W M + W + LR PE H LLTE PLN
Sbjct: 69 DEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPE 128
Query: 432 NXEKMTXIMFETFNTPAMYVAIQAVXRCT 518
N E IMFE+FN P +Y+A+QAV T
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALT 157
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 195
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +3
Query: 300 IEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKANXEKMTXIMFETFNTP 479
++ G++ +W KI H++ N L P HPVL +E+ N +A EK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 480 AMYVAIQAVXRC 515
A Y++ V C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 195
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 252 RDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKA 431
++E K + ++ PIE G V NW +IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 432 NXEKMTXIMFETF 470
+ + I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 252 RDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKA 431
++E K + ++ PIE G V NW +IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 432 NXEKMTXIMFETF 470
+ + I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 192 RGKAPPSGRDGRYGTEGLLCRDEAQSKRG 278
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 142 KAGFAGDDAPRAVFPSIVGRPRHQG 216
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 167 ASSPAKPALHIPEPLSTTNAATSS 96
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 167 ASSPAKPALHIPEPLSTTNAATSS 96
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 167 ASSPAKPALHIPEPLSTTNAATSS 96
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 167 ASSPAKPALHIPEPLSTTNAATSS 96
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,231,511
Number of Sequences: 27780
Number of extensions: 285216
Number of successful extensions: 981
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -