Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060415.seq
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 171 4e-43
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 170 5e-43
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 170 5e-43
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 169 1e-42
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 168 2e-42
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 168 2e-42
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 168 2e-42
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 168 3e-42
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 168 3e-42
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 150 6e-37
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 142 1e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 139 1e-33
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 91 5e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 81 4e-16
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 7e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 49 2e-06
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 46 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.076
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 2.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.2
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.7
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 28 3.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.6
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 27 8.7
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 27 8.7
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 27 8.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 171 bits (415), Expect = 4e-43
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV+NW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 170 bits (414), Expect = 5e-43
Identities = 78/84 (92%), Positives = 78/84 (92%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV NW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 170 bits (414), Expect = 5e-43
Identities = 78/84 (92%), Positives = 78/84 (92%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV NW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFNTPAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 77/84 (91%), Positives = 78/84 (92%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV+NW DM KIWHHTFYNELRVAPE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 168 bits (409), Expect = 2e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHG+V+NW DM KIWHHTFYNELR+APE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN+PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAV 141
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 168 bits (409), Expect = 2e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHG+V+NW DM KIWHHTFYNELR+APE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN+PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAV 141
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 168 bits (409), Expect = 2e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHG+V+NW DM KIWHHTFYNELR+APE HPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN+PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAV 141
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 168 bits (408), Expect = 3e-42
Identities = 76/84 (90%), Positives = 77/84 (91%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV NW DM KIWHHTFYNELRVAPE HP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 168 bits (408), Expect = 3e-42
Identities = 76/84 (90%), Positives = 77/84 (91%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQSKRGILTLKYPIEHGIV NW DM KIWHHTFYNELRVAPE HP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFETFN PAMYVAIQAV
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAV 141
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLYASGRT GIVLDSGDGV
Sbjct: 143 SLYASGRTTGIVLDSGDGV 161
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 150 bits (364), Expect = 6e-37
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKAN 434
DEAQ++RGIL+LKYPIEHG+V+NW DM KIWHHTFYNELR+ PE HP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 435 XEKMTXIMFETFNTPAMYVAIQAV 506
EKMT IMFE+F P+MY+ IQAV
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAV 142
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 273
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SLY+SGRT GIVLDSGDGV
Sbjct: 144 SLYSSGRTTGIVLDSGDGV 162
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 142 bits (344), Expect = 1e-34
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +3
Query: 243 LLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLN 422
L D+A+++ GILTL YP+EHG+V+NW DM KIW+HTFY+ELRVAPE HPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 423 PKANXEKMTXIMFETFNTPAMYVAIQA 503
PKA+ EKMT IMFETF P+MY+ +QA
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQA 95
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
SL+ASGRT G VLDSGDGV
Sbjct: 98 SLHASGRTTGTVLDSGDGV 116
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 139 bits (336), Expect = 1e-33
Identities = 65/97 (67%), Positives = 75/97 (77%)
Frame = +3
Query: 216 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHP 395
RDG E + +E + R ILTLK P+EHGIV NW DM KIWH+TFYNELRV PE HP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 396 VLLTEAPLNPKANXEKMTXIMFETFNTPAMYVAIQAV 506
VLLTEAP NPKAN EKMT IMFE+F+ PAMYV++Q+V
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSV 130
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 255
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 512 LYASGRTXGIVLDSGDGV 565
LY+SGRT G+VLD G+ V
Sbjct: 133 LYSSGRTTGVVLDLGERV 150
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 91.1 bits (216), Expect = 5e-19
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +3
Query: 282 LTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKANXEKMTXIMF 461
L + YP+ +GIV NW DM +W H FYNEL++ P +LLT+ PLNP N EKM MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 462 ETFNTPAMYVAIQAV 506
E +N +++ IQAV
Sbjct: 126 EKYNFAGVFIQIQAV 140
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 255
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 509 SLYASGRTXGIVLDSGDGV 565
+LYA G G+V+DSGDGV
Sbjct: 142 TLYAQGLLTGLVIDSGDGV 160
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 DEAQSK-RGILT--LKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNP 425
DEA +K R T L YPIEHG V +W M + W +N LR PE H LLTE+PL P
Sbjct: 72 DEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Query: 426 KANXEKMTXIMFETFNTPAMYVAIQAV 506
+ E I+FETFN P +Y+A+ +V
Sbjct: 132 PESREYTGEILFETFNVPGLYIAVNSV 158
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 109 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 195
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 68.1 bits (159), Expect = 4e-12
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = +3
Query: 270 KRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKANXEKMT 449
+R + + PI+ GIV++W + IW H F + L + P HP+LL E PLN + EK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 450 XIMFETFNTPAMYVA 494
+MFE + PA+++A
Sbjct: 145 ELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 198
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 198
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 270 KRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKANXEK 443
+R + + P + GIVT+W + +W H F N L + P HP+LL E PLN + EK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +3
Query: 288 LKYPIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPLNPKANXEKMTXIMFET 467
++ PI+ G + N +IW H F + L +AP +LLTEAPL+ + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 468 FNTPAMYVA 494
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 204
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 PIEHGIVTNWXDMXKIWHHTFYNELRVAPEXHPVLLTEAPL-NPKANXEKMTXIMFETFN 473
PIE G++ +W M + + Y L +L PL PKA E++ +MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 474 TPAMYVAIQAV 506
Y + QAV
Sbjct: 117 VSGFYASEQAV 127
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 201
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 213
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 390 HPVLLTEAPLNPKANXEKMTXIMFETFNTPAMYVAIQA 503
HP+L+TE NP + KM ++FET+ PA+ + A
Sbjct: 117 HPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDA 154
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.076
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 233 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 96
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 186 LDRGKAPPSGRDGR--YGTEGLLCRDEAQSKRGILTLK 293
L+RG+ S R GR +G G RD+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 243 LLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAP 383
LL D A L++KY + H I + W + +IW L+ P
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 243 LLCRDEAQSKRGILTLKYPIEHGIVTNWXDMXKIWHHTFYNELRVAP 383
LL D A L++KY + H I + W + +IW L+ P
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 209 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 123
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.0 bits (42), Expect(2) = 2.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -2
Query: 398 DGVXLGGDTQLIVEGMMPNLXHVXPVS 318
DGV +GG + + E ++ ++ P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 561 PSPESSTIPXVRPDAYSEXRL 499
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 209 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 87
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 536 RWYDRTRTAXHGLDGDVHGGRVECFEHD 453
+W +R A + GDVHGG +HD
Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 536 RWYDRTRTAXHGLDGDVHGGRVECFEHD 453
+W +R A + GDVHGG +HD
Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 536 RWYDRTRTAXHGLDGDVHGGRVECFEHD 453
+W +R A + GDVHGG +HD
Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,691,063
Number of Sequences: 28952
Number of extensions: 274046
Number of successful extensions: 725
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -