Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060414.seq
         (550 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0125 - 5537541-5538758                                           29   3.2  
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282...    28   4.3  
10_08_1042 - 22515298-22515354,22515614-22515709,22515806-225159...    27   7.5  
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771...    27   7.5  
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346...    27   9.9  

>10_02_0125 - 5537541-5538758
          Length = 405

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 111 NIGSQN----NIDIEKHANNEKNNHVEEVDQNAETEEKIHRSNNTDISSEQN 254
           N+G+QN    N D EK +N + NN   + + + + +  I   +  D S   N
Sbjct: 292 NVGTQNDNLSNFDSEKDSNGDSNNGTTDANVSKDFQPPIPTPSQNDRSQTDN 343


>10_08_0838 -
           20927020-20927207,20927288-20927491,20927654-20928297,
           20928549-20928788,20928884-20928978,20929087-20929434,
           20929824-20930042,20930422-20930487,20931191-20931362,
           20931456-20931703,20931933-20932073,20932238-20932330,
           20932421-20932471,20933571-20933693,20933793-20934035,
           20934131-20934211,20935245-20935340,20935535-20936320,
           20936443-20937012,20937322-20937427,20938102-20938206,
           20938311-20938432,20939321-20939413,20940081-20940104
          Length = 1685

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 123 QNNIDIEKHANNEKNNHVEEVDQNAE-TEEKIHRSNNTDISSEQNLK 260
           QN++D  K+  NEK N +++++Q     E +I  S++     E+++K
Sbjct: 190 QNDLDWLKYQLNEKANRLQDLNQQKHLLEHRISESDSVATYLEESMK 236


>10_08_1042 -
           22515298-22515354,22515614-22515709,22515806-22515988,
           22516277-22516365,22516481-22516722,22517008-22518116
          Length = 591

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +3

Query: 96  FRKPENIGSQNN--IDIEKHANNEKNNHVEEVDQNAETEEKIHRSNNTDISSEQNLK 260
           +RK E +G+ NN  I +E +   E N+H    + +AE+      S+  D+SS +  K
Sbjct: 166 YRKKE-LGNGNNVYIIVEPNGTQEMNDHFGTSESSAESSN--FESSTDDVSSPKRAK 219


>03_02_0348 +
           7709894-7709926,7710516-7710604,7711202-7711277,
           7712019-7712214,7712449-7712832,7712884-7714804,
           7714906-7714966,7715952-7716371
          Length = 1059

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 123 QNNIDI-EKHANNEKNNHVEEVDQNAETEEKIHRSNN 230
           Q+ I++     ++E+ NH E++ +  + EEKI R  N
Sbjct: 867 QSKIEVLTAELDDERQNHQEDITRYRDLEEKIERYEN 903


>04_04_0027 +
           22232781-22233051,22234256-22234329,22234471-22234638,
           22234812-22234971,22235062-22235145,22235781-22236078,
           22236158-22236364,22236465-22236735,22236971-22237055,
           22237141-22237182,22237302-22237350,22237825-22237894,
           22238314-22238463,22238592-22238619,22238856-22238990,
           22240693-22241469,22242133-22242192,22242367-22242413
          Length = 991

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 141 EKHANNEKNNHVEEVDQNAETEEKIHRSNNTDISSEQNLK**LQMR 278
           +K    EKN    +  +  E   K ++++NTD++  ++ K  LQ R
Sbjct: 440 KKKKTQEKNESENQTPKTQEKNAKGNQTSNTDLTGSESKKQPLQTR 485


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,714,402
Number of Sequences: 37544
Number of extensions: 105094
Number of successful extensions: 372
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)