BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060413.seq
(567 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 3.2
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 3.2
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 22 3.2
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 22 3.2
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 22 4.2
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 7.3
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 7.3
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 7.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 9.7
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 9.7
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 9.7
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 22.2 bits (45), Expect = 3.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 527 ILTCLLYXQVFSLTISKYTWYRRKHSNTSFFDVWILRTGT 408
ILT + + V S TI K+ R S T V +L +GT
Sbjct: 54 ILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGT 93
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 22.2 bits (45), Expect = 3.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 527 ILTCLLYXQVFSLTISKYTWYRRKHSNTSFFDVWILRTGT 408
ILT + + V S TI K+ R S T V +L +GT
Sbjct: 54 ILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGT 93
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/51 (17%), Positives = 26/51 (50%)
Frame = +1
Query: 352 ILMTMATTSGLSSYSSCLTVPVRKIQTSKKLVFECLRLYQVYLEIVRLKTW 504
+++T A SY+ + V + ++ + ++LY +Y +++ + T+
Sbjct: 182 LILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTF 232
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/51 (17%), Positives = 26/51 (50%)
Frame = +1
Query: 352 ILMTMATTSGLSSYSSCLTVPVRKIQTSKKLVFECLRLYQVYLEIVRLKTW 504
+++T A SY+ + V + ++ + ++LY +Y +++ + T+
Sbjct: 108 LILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTF 158
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 340 WLGIILMTMATTSGLSSYSSCL 405
W I+++ TS LSS +C+
Sbjct: 226 WTLILILAKCITSSLSSLYTCI 247
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RILH*IIFVTARPPFDAHLRQCLH 146
R+LH + T P+DA QC++
Sbjct: 83 RLLHDLKGRTTSVPYDALTGQCIY 106
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RILH*IIFVTARPPFDAHLRQCLH 146
R+LH + T P+DA QC++
Sbjct: 83 RLLHDLKGRTTSVPYDALTGQCIY 106
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RILH*IIFVTARPPFDAHLRQCLH 146
R+LH + T P+DA QC++
Sbjct: 83 RLLHDLKGRTTSVPYDALTGQCIY 106
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 84 GRIQQHSNRNKSSAP 128
GR++QH N SS P
Sbjct: 174 GRMRQHVMHNLSSVP 188
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 84 GRIQQHSNRNKSSAP 128
GR++QH N SS P
Sbjct: 174 GRMRQHVMHNLSSVP 188
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 84 GRIQQHSNRNKSSAP 128
GR++QH N SS P
Sbjct: 174 GRMRQHVMHNLSSVP 188
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,555
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -