Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060413.seq
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.3  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   1.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.3  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    23   6.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 90  IQQHSNRNKSSAPSEFNSKCRHCRRCASNGGRAVTKI 200
           +Q H N +  + P     +C+HC  C +  G  +  I
Sbjct: 170 LQNHVNTHTGTKPH----RCKHCDNCFTTSGELIRHI 202


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 454 IRIPASLMFGSCALAQLNM 398
           + +P +L+FGS  L QLN+
Sbjct: 341 VSLPGTLLFGSANLTQLNL 359


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 259  SENNCYSPFKWIFPST 306
            S NNC++P KW + S+
Sbjct: 2756 SANNCWNPLKWDWRSS 2771


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 421 CALAQLNMNCRNSGHWLLP-SSSI*FLASSET 329
           C + +L+   RN+G+W+      +  +ASSET
Sbjct: 30  CLMVELHSVPRNNGNWVADRDGKVAIIASSET 61


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 412 PVRKIQTSKKLVFECLRLYQ 471
           P+R+   +++L+FEC  LY+
Sbjct: 88  PLRRAIVNQRLLFECGTLYK 107


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 431 HQRSWYSNVYVCTR 472
           H +SW SNV  C+R
Sbjct: 766 HDQSWSSNVVDCSR 779


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 312 RKVCDVVSELARNH 353
           RK+ D V+ L RNH
Sbjct: 822 RKIADAVTRLLRNH 835


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,712
Number of Sequences: 2352
Number of extensions: 11532
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)