Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060412.seq
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    27   0.53 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.1  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   3.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   8.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   8.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.7  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 621 IPLVSICHLNIYEL*LLVNLNVDHFXVIHHNKHSRREISTIFSAI 487
           +PL   C + I  L  L ++ +D F VI +  H R ++ST  + I
Sbjct: 171 VPLAQGCSVYISTL-TLTSIAIDRFFVIIYPFHPRMKLSTCITII 214


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/26 (38%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +3

Query: 303 QSLDIVDAIPL-FH-HSHYVSPMAEV 374
           + +D++D +PL +H H+H+ SPM+ +
Sbjct: 444 RGMDLMDDMPLPYHDHNHHNSPMSPI 469


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 306 SLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAG 428
           +LD+ +  P+F+ S   S +  ++ T +  + Q+ N   +G
Sbjct: 588 NLDLANLDPVFNSSELRSVLGSLSTTDLNRLEQTANMQTSG 628


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 76  YN*LIIVFSFYYSNFITIGTYLSS 5
           Y    +VF F     I IGTYLS+
Sbjct: 349 YTTFTLVFMFIIPLLILIGTYLST 372


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 76  YN*LIIVFSFYYSNFITIGTYLSS 5
           Y    +VF F     I IGTYLS+
Sbjct: 350 YTTFTLVFMFIIPLLILIGTYLST 373


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 255 GVLLADAGKTKEGGRNQSLDIVD 323
           GV L +AG T    RN+   IVD
Sbjct: 146 GVTLGNAGTTPTFNRNKRTSIVD 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,371
Number of Sequences: 2352
Number of extensions: 11945
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)