Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060412.seq
(666 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 51 4e-06
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 51 4e-06
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 51 4e-06
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 51 4e-06
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 51 4e-06
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 51 4e-06
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 44 5e-04
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 43 0.001
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 42 0.002
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 41 0.003
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFVIILLKDVQGXXXXX 497
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E V
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASR 114
Query: 498 XXXXFPFCCVYCGG*XKNGQHLDSPAIKVHKYSDGKWRPRE 620
F + K +P I V+++ + +WR R+
Sbjct: 115 IAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 255 GVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYY 434
G+ LA A ++ EG L + D +PLFH +S M EVAL Q++ V+AGYY
Sbjct: 28 GLFLAPAPRSGEG-----LCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYY 82
Query: 435 AA 440
A
Sbjct: 83 HA 84
Score = 39.5 bits (88), Expect = 0.011
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFL 267
M EV I AY K+ LHAA+YPH AV FL
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 294 GRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAA 440
G + L + D +PLFH +S M EVAL Q++ V+AGYY A
Sbjct: 36 GSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA 84
Score = 37.9 bits (84), Expect = 0.032
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFL 267
M EV I Y K+ LHAA+YPH AV FL
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFL 31
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFLLMPERLRK 291
M V + T AY K++LH AKYPHCAV + ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 318 VDAIPLFHHSHYVSPMAEVALT 383
VD IPLFH + ++PM EVALT
Sbjct: 55 VDCIPLFHGTLALAPMLEVALT 76
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 255 GVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYY 434
G+ LA A ++ E L + D +PLFH +S M EVAL Q++ V+AGYY
Sbjct: 28 GLFLAPAPRSGE-----CLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYY 82
Query: 435 AA 440
A
Sbjct: 83 HA 84
Score = 39.5 bits (88), Expect = 0.011
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1
Query: 175 MSEVSIETGAYAKIILHAAKYPHCAVKVCFL 267
M EV I AY K+ LHAA+YPH AV FL
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,706,925
Number of Sequences: 237096
Number of extensions: 1722906
Number of successful extensions: 6378
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6378
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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