Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060411.seq
         (563 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ...    29   4.3  
AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-P...    28   7.6  

>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
            protein.
          Length = 1314

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 471  ESGAAGAQPTRARPYPRASTPHRPVEC 551
            ES    A   R RP PR ++PH P EC
Sbjct: 1182 ESKLDSAALCRPRPRPRQASPHLPPEC 1208


>AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-PA
           protein.
          Length = 461

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 492 QPTRARPYPRASTPHRP 542
           Q TR+ PYPR  +P+RP
Sbjct: 13  QKTRSHPYPRRISPYRP 29


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,771,092
Number of Sequences: 53049
Number of extensions: 523594
Number of successful extensions: 883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)