Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060409.seq
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024684-1|BAB14960.1|  126|Homo sapiens protein ( Homo sapiens ...    31   2.8  

>AK024684-1|BAB14960.1|  126|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21031 fis, clone CAE07336. ).
          Length = 126

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -3

Query: 458 SRQCHDDCPG*MWPMPVAVLLQHLSVLFLCGADLYPLLWRGASPFFAPTQPSDLTCSTSW 279
           S  C    P  +WP   A LL HLS LF+C   L P   +  + F   +    L  S++W
Sbjct: 28  SLPCLKSFPVSLWPWGRASLLCHLSRLFVCHRPLTPTS-QAPNMFSCVSSSLTLAASSAW 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,395,863
Number of Sequences: 237096
Number of extensions: 1740005
Number of successful extensions: 7826
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7818
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)