Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060408.seq
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.50 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.50 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   0.66 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   2.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 298 IEKQKRKEKQLYANMFDKFAKHDNEVTG 381
           I+  + KE +LYAN+     +   E+TG
Sbjct: 330 IQYAQHKENELYANLMKIVHEKQQEITG 357


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 298 IEKQKRKEKQLYANMFDKFAKHDNEVTG 381
           I+  + KE +LYAN+     +   E+TG
Sbjct: 368 IQYAQHKENELYANLMKIVHEKQQEITG 395


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 52  VSSSEPRSSLLEGDSNPPFRSE 117
           VS++  +S  LEGD  PP+  E
Sbjct: 745 VSTTSVKSLRLEGDETPPYGME 766


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 310 KRKEKQLYANMFDKFA 357
           ++K+K  + NMF KFA
Sbjct: 452 EKKDKNSFFNMFKKFA 467


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 310 KRKEKQLYANMFDKFA 357
           ++K+K  + NMF KFA
Sbjct: 452 EKKDKNSFFNMFKKFA 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,103
Number of Sequences: 438
Number of extensions: 1482
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)