Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060407.seq
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    29   0.11 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.99 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.0  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   5.3  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   9.3  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 84  DGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 206
           D   A   QH+  RP+RS + NP       GR H  C+SRR
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNP------AGRQHDRCDSRR 307


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 370 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 257
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 99  EYPQHVCDRPRRSRQVNPHGLVGFQGR-YHCWCE--SRRDPFH*HA*GRTRPLHHIKSTA 269
           ++P HVC+R  R+  +N   +V   G  ++C  +  S R+    +   + +  HH K   
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHGLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLCK 409

Query: 270 ISMFFELE 293
           I    E+E
Sbjct: 410 IGRLSEVE 417


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 475 FCTHTPDTQSTTTRAPSVTRSAAVTS 398
           +CT++ D+ +TTT   S + S+  T+
Sbjct: 470 YCTYSSDSTTTTTTTKSASTSSHSTT 495


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 561 SSRRAPFHXVHEQNR 517
           SS+R+PFH  H+Q +
Sbjct: 20  SSQRSPFHHHHQQQQ 34


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +3

Query: 72  DPWDDGQEAEYPQHVCDRPRRSRQVNP 152
           D WDD  + E+   + D P    +  P
Sbjct: 248 DDWDDEMDGEWEPPMIDNPEYKGEWKP 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,522
Number of Sequences: 2352
Number of extensions: 11467
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)